RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PCTPQ9UKL6 214 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 C9J4A7 227 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 P2RX6O15547 441 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 PRPF4O43172 522 aaKnown RBP eCLIP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 DLX3O60479 287 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 PRAMEF4O60810 478 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 IMPDH1P20839 514 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 DLSTP36957 453 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 HNF4AP41235 474 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 PRKAA2P54646 552 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 TMPRSS3P57727 454 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 HERVK_113P63132 956 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 RGS1Q08116 209 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 RBBP5Q15291 538 aaKnown RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 PRAMEF9Q5VWM5 478 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 LIPJQ5W064 366 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 GOLGA7Q7Z5G4 137 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 CT55Q8WUE5 264 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 MAGEB10Q96LZ2 347 aaPredicted RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 C10orf90Q96M02 699 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 STMN4Q9H169 189 aaPredicted RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 CHST8Q9H2A9 424 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 IPPKQ9H8X2 491 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 NDOR1Q9UHB4 597 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 CROTQ9UKG9 612 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 PLLPQ9Y342 182 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 URADA6NGE7 173 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 LRRC14BA6NHZ5 514 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 RECKO95980 971 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 MYZAPP0CAP1 466 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 MYL2P10916 166 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 LIFP15018 202 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 SERPINB1P30740 379 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 HPDP32754 393 aaPredicted RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 RPS15P62841 145 aaKnown RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 DNASE1L3Q13609 305 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 NKAIN1Q4KMZ8 207 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 TNFAIP8L3Q5GJ75 292 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 C1orf189Q5VU69 101 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 GRHL2Q6ISB3 625 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 TMEM214Q6NUQ4 689 aaKnown RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 NIPAL1Q6NVV3 410 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ZYG11AQ6WRX3 759 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 CCDC81Q6ZN84 652 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ANKRD53Q8N9V6 530 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ZSCAN1Q8NBB4 408 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 FKBP10Q96AY3 582 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 L3HYPDHQ96EM0 354 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 RNF31Q96EP0 1072 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 SLC45A3Q96JT2 553 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 NTMT1Q9BV86 223 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 RHBGQ9H310 441 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 AKIRIN1Q9H9L7 192 aaPredicted RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 SSU72Q9NP77 194 aaKnown RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ADGRE2Q9UHX3 823 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 TSC22D4Q9Y3Q8 395 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ACTL7BQ9Y614 415 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 SLC22A7Q9Y694 548 aa12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
CKAP2-202ENST00000378034 ANKDD1BA6NHY2 528 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 G3V2L1 256 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 NDUFS4O43181 175 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CLEC3AO75596 197 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 ALBP02768 609 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 SERPINA6P08185 405 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 ITPKBP27987 946 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 MC1RQ01726 317 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CASP8Q14790 479 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CRTC2Q53ET0 693 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 MED27Q6P2C8 311 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 FAM199XQ6PEV8 388 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 VASH2Q86V25 355 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 LAS2Q8IYD9 372 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 L3MBTL4Q8NA19 623 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 PPP4R1Q8TF05 950 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 ATP6V1E2Q96A05 226 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 RUFY1Q96T51 708 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 DRC3Q9H069 523 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 NOL11Q9H8H0 719 aaKnown RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF304Q9HCX3 659 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 WDR70Q9NW82 654 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 IFT80Q9P2H3 777 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 GPN3Q9UHW5 284 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF490Q9ULM2 529 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 FARSAQ9Y285 508 aaKnown RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 MAP1BP46821 2468 aaKnown RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 DMXL2Q8TDJ6 3036 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CLDN9O95484 217 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CAPN1P07384 714 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CPA3P15088 417 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 H2AFXP16104 143 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CD22P20273 847 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 PTPN4P29074 926 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CCNG1P51959 295 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms