RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CXorf40BQ96DE9 158 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PSKH2Q96QS6 385 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 NEUROD4Q9HD90 331 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PRELID1Q9Y255 219 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 C1QTNF3-AMACRE9PGA6 284 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ARVCFO00192 962 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PCDH8O95206 1070 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CPNE6O95741 557 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ALPPP05187 535 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SLC35G4P0C7Q5 338 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 RPS3P23396 243 aaKnown RBP eCLIP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ACRV1P26436 265 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PCSK6P29122 969 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SHMT2P34897 504 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CAPZA2P47755 286 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 DGKGP49619 791 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 RGS8P57771 180 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SKP1P63208 163 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 EMX1Q04741 257 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SOX4Q06945 474 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PPIGQ13427 754 aaKnown RBP eCLIP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PTGES3Q15185 160 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 UBE2J2Q8N2K1 259 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ADAMTS15Q8TE58 950 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 JPH3Q8WXH2 748 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 EXOSC8Q96B26 276 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 IL4I1Q96RQ9 567 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 MGLLQ99685 303 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PDCD10Q9BUL8 212 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 BHLHE41Q9C0J9 482 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 BTBD1Q9H0C5 482 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 UPB1Q9UBR1 384 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SSC5DA1L4H1 1573 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PI15O43692 258 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ERAL1O75616 437 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 OPN1SWP03999 348 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 UGT2B10P36537 528 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ARCN1P48444 511 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 FOXA1P55317 472 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 RPS3AP61247 264 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 DSG2Q14126 1118 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PTPRCAPQ14761 206 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 TRAM1Q15629 374 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CDKL4Q5MAI5 379 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 B3GNT8Q7Z7M8 397 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SERPINA11Q86U17 422 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 MOSPD2Q8NHP6 518 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 NETO1Q8TDF5 533 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 FRS2Q8WU20 508 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 C3orf30Q96M34 536 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 TNKS2Q9H2K2 1166 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 TTYH1Q9H313 450 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ITM2CQ9NQX7 267 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ASAH2Q9NR71 780 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 MED11Q9P086 117 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CFAP97Q9P2B7 532 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 MALT1Q9UDY8 824 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SLC22A14Q9Y267 594 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHGA8Q9Y5G5 932 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 EIF3FO00303 357 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 EFNA1P20827 205 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 AGXTP21549 392 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 UQCRC2P22695 453 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ADARB1P78563 741 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 HSPB3Q12988 150 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SLC13A2Q13183 592 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 PIWIL3Q7Z3Z3 882 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 TOMM5Q8N4H5 51 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 RHOXF1Q8NHV9 184 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 GNPDA2Q8TDQ7 276 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 REEP4Q9H6H4 257 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 HCN1O60741 890 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SEMA3DO95025 777 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ECDO95905 644 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 VIPP01282 170 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ALPIP09923 528 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 IQCF3P0C7M6 154 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 OR1D2P34982 312 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 GDF5P43026 501 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 TAS2R43P59537 309 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SGCGQ13326 291 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 TCEA2Q15560 299 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 DESI1Q6ICB0 168 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 BAIAP2L2Q6UXY1 529 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CTU1Q7Z7A3 348 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 OR10Q1Q8NGQ4 319 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SMG7Q92540 1137 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 UBXN10Q96LJ8 280 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CCDC3Q9BQI4 270 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 GTPBP2Q9BX10 602 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 C14orf119Q9NWQ9 140 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ATAD5Q96QE3 1844 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ABCA3Q99758 1704 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 OR1I1O60431 355 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ITGA10O75578 1167 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 JUNP05412 331 aaKnown RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 RHCEP18577 417 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ATF4P18848 351 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 CRISP1P54107 249 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms