RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 OR6Y1Q8NGX8 325 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SH3YL1Q96HL8 342 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 DEFB126Q9BYW3 111 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 MARK1Q9P0L2 795 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SAMHD1Q9Y3Z3 626 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 DOCK8Q8NF50 2099 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 OTOL1A6NHN0 477 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SAGP10523 405 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 FBLP22087 321 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 PPIBP23284 216 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 NUDT1P36639 197 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 TUBB3Q13509 450 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SGCBQ16585 318 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 NRF1Q16656 503 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 WASHC2DQ5SRD0 308 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 GLYATQ6IB77 296 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 IYDQ6PHW0 289 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 TMEM92Q6UXU6 159 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 MACC1Q6ZN28 852 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 PLEKHM3Q6ZWE6 761 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 ZNF534Q76KX8 674 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SPNS2Q8IVW8 549 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 HUS1BQ8NHY5 278 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 LRRC3BQ96PB8 259 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 CTRCQ99895 268 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SAR1AQ9NR31 198 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SCN3BQ9NY72 215 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 KLRF1Q9NZS2 232 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 CLEC1BQ9P126 229 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SERGEFQ9UGK8 458 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 PHF11Q9UIL8 331 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 RPS6KA6Q9UK32 745 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 OARD1Q9Y530 152 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 PCDHGA2Q9Y5H1 932 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 ZNF318Q5VUA4 2279 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 PRMT3O60678 531 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 RPLP0P05388 317 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 BMP7P18075 431 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 PEX19P40855 299 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 UFM1P61960 85 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SHC2P98077 582 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 CAMK1Q14012 370 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 RFTN2Q52LD8 501 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SPIN4Q56A73 249 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 C3orf38Q5JPI3 329 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 CASP12Q6UXS9 341 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 KLHDC8AQ8IYD2 350 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 ST13P4Q8IZP2 240 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SYNPOQ8N3V7 929 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 OR2L2Q8NH16 312 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 RAB8BQ92930 207 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 ZFYVE21Q9BQ24 234 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 DNAAF2Q9NVR5 837 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 EHD3Q9NZN3 535 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 FZD4Q9ULV1 537 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 CORO2BQ9UQ03 480 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 SCN10AQ9Y5Y9 1956 aa8.15□□□□□ -1.1
CRNKL1-202ENST00000377340 DYTNA2CJ06 578 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 KLHL33A6NCF5 533 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 MCIDASD6RGH6 385 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 WFS1O76024 890 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PDE9AO76083 593 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PDYNP01213 254 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 OPN1SWP03999 348 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 HSMCR30P0CW71 290 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 IMPDH2P12268 514 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 GLULP15104 373 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 NCK1P16333 377 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 ALOX12P18054 663 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 HK2P52789 917 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SPIBQ01892 262 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 FCHO2Q0JRZ9 810 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 MPP2Q14168 576 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PPP1R3AQ16821 1122 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 TTC33Q6PID6 262 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 NXPE4Q6UWF7 544 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 HMGN2P46Q86SG4 172 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SYVN1Q86TM6 617 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PDZD3Q86UT5 571 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 MICU2Q8IYU8 434 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 RCBTB1Q8NDN9 531 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 MAGEE2Q8TD90 523 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PTERQ96BW5 349 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SLC12A9Q9BXP2 914 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 TTYH1Q9H313 450 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 MYOFQ9NZM1 2061 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 TMEM221A6NGB7 291 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 M0R296 226 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PEX1O43933 1283 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 RNH1P13489 461 aaKnown RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PAICSP22234 425 aaKnown RBP8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SLC7A1P30825 629 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 PTGER1P34995 402 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 KCNJ2P63252 427 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 ABATP80404 500 aa8.15□□□□□ -1.11
CRNKL1-202ENST00000377340 SLC18A2Q05940 514 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms