RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 REXO5Q96IC2 774 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR2M4Q96R27 311 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GPSM3Q9Y4H4 160 aa17.29■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GABRR3A8MPY1 467 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SH3BGRLO75368 114 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TGFB1P01137 390 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GSNP06396 782 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RETP07949 1114 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ZCCHC18P0CG32 403 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TPMTP51580 245 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PRKCQQ04759 706 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PDE7AQ13946 482 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CLCA4Q14CN2 919 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GCNT7Q6ZNI0 430 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PHACTR4Q8IZ21 702 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 C2orf73Q8N5S3 287 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CDC26Q8NHZ8 85 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 AURKBQ96GD4 344 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PANX1Q96RD7 426 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ACAT2Q9BWD1 397 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 BHLHE41Q9C0J9 482 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR51B5Q9H339 312 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 REEP4Q9H6H4 257 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 IMP3Q9NV31 184 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 EXO1Q9UQ84 846 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 BTBD3Q9Y2F9 522 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PLEKHM1Q9Y4G2 1056 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 AP4B1Q9Y6B7 739 aa17.28■□□□□ 0.36
HLA-DQB1-201ENST00000374943 POM121BA6NF01 834 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LRRC72A6NJI9 287 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CXCR6O00574 342 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RNASET2O00584 256 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MBTPS2O43462 519 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LATO43561 262 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 LYNP07948 512 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 HOXB6P17509 224 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 IL1RNP18510 177 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 HNRNPA2B1P22626 353 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 IGFBP4P22692 258 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SOX11P35716 441 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 IKBIPQ70UQ0 350 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 R3HCC1LQ7Z5L2 792 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GALNT4Q8N4A0 578 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 VPS37AQ8NEZ2 397 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FIG4Q92562 907 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MTERF3Q96E29 417 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 NRTNQ99748 197 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CIB1Q99828 191 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MYOCQ99972 504 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 UGT2B28Q9BY64 529 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CD93Q9NPY3 652 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CUEDC1Q9NWM3 386 aaPredicted RBP17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SCOCQ9UIL1 159 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 HEBP2Q9Y5Z4 205 aa17.27■□□□□ 0.36
HLA-DQB1-201ENST00000374943 UNC80Q8N2C7 3258 aa17.27■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TCRBV21S2A2A0A5A6 115 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 EVPLLA8MZ36 301 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 YY2O15391 372 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KLHL18O94889 574 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 EPN2O95208 641 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 APBB3O95704 486 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 RAP2AP10114 183 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GPX2P18283 190 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GABRG2P18507 467 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ACSL1P33121 698 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CLCN2P51788 898 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PDK3Q15120 406 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FAM98BQ52LJ0 330 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FAM71E1Q6IPT2 247 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TMEM154Q6P9G4 183 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 WASH2PQ6VEQ5 465 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZBTB49Q6ZSB9 765 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SPRED1Q7Z699 444 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SLC9B2Q86UD5 537 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 EPHX4Q8IUS5 362 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 WDR48Q8TAF3 677 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C16orf78Q8WTQ4 265 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FAM3CQ92520 227 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 WDR92Q96MX6 357 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MS4A8Q9BY19 250 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CARS2Q9HA77 564 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OLAHQ9NV23 265 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 AHSPQ9NZD4 102 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MOSPD1Q9UJG1 213 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PCDHB11Q9Y5F2 797 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 A6NHS1 94 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ANKDD1BA6NHY2 528 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PDZK1P1A8MUH7 402 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CLIC1O00299 241 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TXNDC9O14530 226 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TPST1O60507 370 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SMNDC1O75940 238 aaKnown RBP eCLIP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TBX6O95947 436 aaPredicted RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PPIBP23284 216 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PSMB5P28074 263 aa17.26■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CLDN2P57739 230 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms