RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 TRAPPC2P0DI81 140 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 TRAPPC2BP0DI82 140 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 HLA-EP13747 358 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 KRT6CP48668 564 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 CCL15Q16663 113 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 GATAD2AQ86YP4 633 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 GALNT6Q8NCL4 622 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 SELENOMQ8WWX9 145 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 CRELD1Q96HD1 420 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 SPON2Q9BUD6 331 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 CWH43Q9H720 699 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 MBD1Q9UIS9 605 aaPredicted RBP16.91■□□□□ 0.3
CHUK-201ENST00000370397 CFL2Q9Y281 166 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 ANGPTL3Q9Y5C1 460 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 PCDHB11Q9Y5F2 797 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 ZNF7P17097 686 aaPredicted RBP16.91■□□□□ 0.3
CHUK-201ENST00000370397 AOAHP28039 575 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 GLYR1Q49A26 553 aaPredicted RBP16.91■□□□□ 0.3
CHUK-201ENST00000370397 LINGO4Q6UY18 593 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 ZNF605Q86T29 641 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 RBFAQ8N0V3 343 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 SPATA17Q96L03 361 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 ADAM2Q99965 735 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 DOHHQ9BU89 302 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 MS4A12Q9NXJ0 267 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 FTSJ1Q9UET6 329 aa16.91■□□□□ 0.3
CHUK-201ENST00000370397 A8MV72 311 aaPredicted RBP16.9■□□□□ 0.3
CHUK-201ENST00000370397 SLITRK5O94991 958 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 MAP2K5Q13163 448 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 CLLU1OSQ5K130 101 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 CDKL4Q5MAI5 379 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 SPANXN2Q5MJ10 180 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 LAS2Q8IYD9 372 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 FLCNQ8NFG4 579 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 KCNS3Q9BQ31 491 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 C19orf43Q9BQ61 176 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 SMURF1Q9HCE7 757 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 AP1M2Q9Y6Q5 423 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 PNMA8CA0A1B0GUJ8 204 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 EVPLLA8MZ36 301 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 TNFRSF1BP20333 461 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 PRPS1L1P21108 318 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 RGS4P49798 205 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 DEFA1P59665 94 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 DEFA3P59666 94 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 B4GALNT1Q00973 533 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 APOLD1Q96LR9 279 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 EBPLQ9BY08 206 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 MCOLN1Q9GZU1 580 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 SLC25A19Q9HC21 320 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 KRT8P05787 483 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 LAMP1P11279 417 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 ITGA2P17301 1181 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 PCGF2P35227 344 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 RAE1P78406 368 aaKnown RBP16.9■□□□□ 0.3
CHUK-201ENST00000370397 SMUG1Q53HV7 270 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 ZNF517Q6ZMY9 492 aaPredicted RBP16.9■□□□□ 0.3
CHUK-201ENST00000370397 RTN4RL1Q86UN2 441 aaPredicted RBP16.9■□□□□ 0.3
CHUK-201ENST00000370397 RNF130Q86XS8 419 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 GPR151Q8TDV0 419 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 TPD52L3Q96J77 140 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 MGLLQ99685 303 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 SPATA9Q9BWV2 254 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 TPT1P8Q9HAU6 139 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 PCDHB9Q9Y5E1 797 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 DSPPQ9NZW4 1301 aa16.9■□□□□ 0.3
CHUK-201ENST00000370397 KRT87PA6NCN2 255 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 CBX4O00257 560 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 EPN2O95208 641 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 CRYBB2P43320 205 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 SELENOWP63302 87 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 CYP4F2P78329 520 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 MICAQ29983 383 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 WBP2Q969T9 261 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 EXO1Q9UQ84 846 aaKnown RBP16.89■□□□□ 0.29
CHUK-201ENST00000370397 CCDC88CQ9P219 2028 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 MEIOCA2RUB1 952 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 HMX3A6NHT5 357 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 OLR1P78380 273 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 TSTQ16762 297 aaKnown RBP16.89■□□□□ 0.29
CHUK-201ENST00000370397 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 ZNF770Q6IQ21 691 aaPredicted RBP16.89■□□□□ 0.29
CHUK-201ENST00000370397 RASGRP3Q8IV61 690 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 OR10G2Q8NGC3 310 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 ULK4Q96C45 1275 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 TMCO6Q96DC7 493 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 TMEM246Q9BRR3 403 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 ACOXLQ9NUZ1 547 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 FAM120CQ9NX05 1096 aaKnown RBP16.89■□□□□ 0.29
CHUK-201ENST00000370397 OR51B4Q9Y5P0 310 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 A0A0X1KG70 313 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 PCDH7O60245 1069 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 CLDN11O75508 207 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 CYP2A7P20853 494 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 RGNQ15493 299 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 ZFP69Q49AA0 526 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 SNAP47Q5SQN1 464 aa16.89■□□□□ 0.29
CHUK-201ENST00000370397 LRRC70Q7Z2Q7 622 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms