RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 BHLHE41Q9C0J9 482 aaPredicted RBP12.68□□□□□ -0.38
ECM1-202ENST00000369047 TPT1P8Q9HAU6 139 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 TM9SF3Q9HD45 589 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 ATAD3AQ9NVI7 634 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 ATXN10Q9UBB4 475 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 ATP6V1HQ9UI12 483 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 BAG5Q9UL15 447 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 COQ6Q9Y2Z9 468 aa12.68□□□□□ -0.38
ECM1-202ENST00000369047 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
ECM1-202ENST00000369047 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 C1QTNF3-AMACRE9PGA6 284 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 SLC16A6O15403 523 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 DPM1O60762 260 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 POP7O75817 140 aaKnown RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 JUNBP17275 347 aaPredicted RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 RPL10P27635 214 aaKnown RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 PIK3CBP42338 1070 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 RXRGP48443 463 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 PHEXP78562 749 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 ZNF234Q14588 700 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 GAB4Q2WGN9 574 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 ZNF773Q6PK81 442 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 CBLL1Q75N03 491 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 EIF3MQ7L2H7 374 aaKnown RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 ZNF551Q7Z340 670 aaPredicted RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 R3HCC1LQ7Z5L2 792 aaKnown RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 ARL10Q8N8L6 244 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 SNX19Q92543 992 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 MYADMQ96S97 322 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 ASPSCR1Q9BZE9 553 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 GABARAPL1Q9H0R8 117 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 SOX17Q9H6I2 414 aaPredicted RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 CXorf21Q9HAI6 301 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 SMURF2Q9HAU4 748 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 TRPV4Q9HBA0 871 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 ZNF282Q9UDV7 671 aaPredicted RBP12.67□□□□□ -0.38
ECM1-202ENST00000369047 BLOC1S6Q9UL45 172 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 VPS4AQ9UN37 437 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 LRRK1Q38SD2 2015 aa12.67□□□□□ -0.38
ECM1-202ENST00000369047 GNG14A0A1W2PPG7 69 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 MMP20O60882 483 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 ETHE1O95571 254 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 ZNF682O95780 498 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 B3GALT4O96024 378 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 HLA-EP13747 358 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 ACADLP28330 430 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 RYKP34925 604 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 NUP107P57740 925 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 RPS13P62277 151 aaKnown RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 TAP2Q03519 686 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 SLC14A1Q13336 389 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 TUBA3CQ13748 450 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 SPIDRQ14159 915 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 BROXQ5VW32 411 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 OR2T5Q6IEZ7 315 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 PIWIL3Q7Z3Z3 882 aaKnown RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 TMPRSS11BQ86T26 416 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 LRRC56Q8IYG6 542 aaPredicted RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 OR2T29Q8NH02 315 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 GOT1L1Q8NHS2 421 aaPredicted RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 CXorf40AQ8TE69 158 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 SH3KBP1Q96B97 665 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 MTERF3Q96E29 417 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 MBOAT4Q96T53 435 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 UTS2RQ9UKP6 389 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 DNMT3AQ9Y6K1 912 aaPredicted RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 LOC100130705A0A1B0GUX0 176 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 HEPACAM2A8MVW5 462 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 K7ESM1 405 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 HS6ST1O60243 411 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 PCDH7O60245 1069 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 UGT2B11O75310 529 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 SEMG1P04279 462 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 FABP3P05413 133 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 METAP1P53582 386 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 IST1P53990 364 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 TPD52P55327 224 aaPredicted RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 GABARAPL2P60520 117 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 ZNF763Q0D2J5 394 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 TEAD4Q15561 434 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 FAM46CQ5VWP2 391 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 NXPE4Q6UWF7 544 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 ADAMTSL4Q6UY14 1074 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 TMEM26Q6ZUK4 368 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 PTOV1Q86YD1 416 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 DCP2Q8IU60 420 aaKnown RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 CLVS1Q8IUQ0 354 aaPredicted RBP12.66□□□□□ -0.38
ECM1-202ENST00000369047 CLECL1Q8IZS7 167 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.66□□□□□ -0.38
ECM1-202ENST00000369047 SLC5A11Q8WWX8 675 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 RAD51AP1Q96B01 352 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 DOK1Q99704 481 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 REEP4Q9H6H4 257 aa12.66□□□□□ -0.38
ECM1-202ENST00000369047 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms