RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ANXA5P08758 320 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 POU1F1P28069 291 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 ZNF45Q02386 682 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 ZNF605Q86T29 641 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 ZSWIM9Q86XI8 627 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 MYDGFQ969H8 173 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 TMEM121BQ9BXQ6 578 aaPredicted RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 ZFYVE1Q9HBF4 777 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 LHX3Q9UBR4 397 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 MUTYHQ9UIF7 546 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 TBC1D24Q9ULP9 559 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 FAM227AF5H4B4 570 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 BPIP17213 487 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 PSMA3P25788 255 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 GGT2P36268 569 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 ATP5C1P36542 298 aaKnown RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 SLC15A1P46059 708 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 PRKCDQ05655 676 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 PPIGQ13427 754 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKN-205ENST00000366897 GAB1Q13480 694 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 TTLL9Q3SXZ7 439 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 NEK10Q6ZWH5 1172 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 NAGSQ8N159 534 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 OR10G2Q8NGC3 310 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 WFDC5Q8TCV5 224 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 UROC1Q96N76 676 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 DEFB118Q96PH6 123 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 PRRG3Q9BZD7 231 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 SLC32A1Q9H598 525 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 PAK6Q9NQU5 681 aaPredicted RBP13.11□□□□□ -0.31
PRKN-205ENST00000366897 RHCGQ9UBD6 479 aa13.11□□□□□ -0.31
PRKN-205ENST00000366897 TMEM229AB2RXF0 380 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 SUV39H1O43463 412 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 SCN2BO60939 215 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 MTX2O75431 263 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CKMT1AP12532 417 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 PTPN2P17706 415 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 AMD1P17707 334 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ATF6P18850 670 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ITGALP20701 1170 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 HTR3AP46098 478 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CCL23P55773 120 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 SPIBQ01892 262 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 BOP1Q14137 746 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 GANABQ14697 944 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 PRSS55Q6UWB4 352 aaPredicted RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 ZNF852Q6ZMS4 543 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 FOXJ1Q92949 421 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 MYO19Q96H55 970 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 MMP28Q9H239 520 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 IMPAD1Q9NX62 359 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ASIC5Q9NY37 505 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 DNMT3LQ9UJW3 386 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 WBP11Q9Y2W2 641 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CLDN11O75508 207 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 PRPS2P11908 318 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 GPX2P18283 190 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 TNFSF8P32971 234 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 DEFA1P59665 94 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 DEFA3P59666 94 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 SLAMF1Q13291 335 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 NDUFA5Q16718 116 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 EXOC3L2Q2M3D2 409 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 TUBA3EQ6PEY2 450 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 GPR156Q8NFN8 814 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 FCGR1BQ92637 280 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 TESCQ96BS2 214 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 FAM193BQ96PV7 902 aaPredicted RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 TRNT1Q96Q11 434 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 MOV10Q9HCE1 1003 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 TIGARQ9NQ88 270 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 NDUFAF4Q9P032 175 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CFAP20Q9Y6A4 193 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 WWP2O00308 870 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ADAM12O43184 909 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 COCHO43405 550 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 GCM2O75603 506 aaPredicted RBP13.1□□□□□ -0.31
PRKN-205ENST00000366897 GBAP04062 536 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 ACRV1P26436 265 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 CCR7P32248 378 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 SOX3P41225 446 aa13.1□□□□□ -0.31
PRKN-205ENST00000366897 MXD1Q05195 221 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms