RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 WWTR1Q9GZV5 400 aa4.42□□□□□ -1.7
RPL39-201ENST00000361575 UPF2Q9HAU5 1272 aaKnown RBP4.42□□□□□ -1.7
RPL39-201ENST00000361575 ZFP57Q9NU63 452 aa4.42□□□□□ -1.7
RPL39-201ENST00000361575 DONSONQ9NYP3 566 aa4.42□□□□□ -1.7
RPL39-201ENST00000361575 TAAR2Q9P1P5 351 aa4.42□□□□□ -1.7
RPL39-201ENST00000361575 TRIM10Q9UDY6 481 aa4.42□□□□□ -1.7
RPL39-201ENST00000361575 IGHV4-61A0A0C4DH41 118 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 TRBV2A0A0J9YWF9 115 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 RNF103-CHMP3A0A140T963 221 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 A0A1B0GUV1 79 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 SLC15A5A6NIM6 579 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 RNF103O00237 685 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 ZNF197O14709 1029 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 MLNRO43193 412 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 DFFBO76075 338 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 IGHV4-59P01825 116 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 RAF1P04049 648 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 KRT3P12035 628 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 RPA1P27694 616 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 RBMS1P29558 406 aaKnown RBP4.41□□□□□ -1.7
RPL39-201ENST00000361575 OR1D5P58170 312 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 RPP38P78345 283 aaKnown RBP4.41□□□□□ -1.7
RPL39-201ENST00000361575 ABRQ12979 859 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 C20orf194Q5TEA3 1177 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 ZNF324BQ6AW86 544 aaPredicted RBP4.41□□□□□ -1.7
RPL39-201ENST00000361575 MFSD7Q6UXD7 560 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 COX8CQ7Z4L0 72 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 SMIM29Q86T20 159 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 ERC1Q8IUD2 1116 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 ELMOD2Q8IZ81 293 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 KIRREL3Q8IZU9 778 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 CNNM3Q8NE01 707 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 OR4C3Q8NH37 302 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 CD101Q93033 1021 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 LGALS12Q96DT0 336 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 LYZL4Q96KX0 146 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 PKP2Q99959 881 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 NTMT1Q9BV86 223 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 PANK2Q9BZ23 570 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 EGLN3Q9H6Z9 239 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 PDRG1Q9NUG6 133 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 SPASTQ9UBP0 616 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 PILRBQ9UKJ0 227 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 PCDHGB1Q9Y5G3 927 aa4.41□□□□□ -1.7
RPL39-201ENST00000361575 SRRM4A7MD48 611 aaKnown RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 SNURFLB1AK76 121 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 KIF5CO60282 957 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 NADKO95544 446 aaPredicted RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 CETPP11597 493 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 CDK4P11802 303 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 GJB2P29033 226 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 SFNP31947 248 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 CEACAM8P31997 349 aaPredicted RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 OR1D2P34982 312 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 CAMLGP49069 296 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 DNA2P51530 1060 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 SRP54P61011 504 aaKnown RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 ARL16Q0P5N6 197 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 PDLIM3Q53GG5 364 aaPredicted RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 ARMCX4Q5H9R4 360 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 TOR1AIP1Q5JTV8 583 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 STHQ8IWL8 128 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 TMEM185AQ8NFB2 350 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 OR7A2PQ8NGA2 310 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 OR13C3Q8NGS6 347 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 CD99L2Q8TCZ2 262 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 HPSE2Q8WWQ2 592 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 TMEM186Q96B77 213 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 SLCO4A1Q96BD0 722 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 ZNF354BQ96LW1 612 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 NEDD4LQ96PU5 975 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 FAM111AQ96PZ2 611 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 BTBD9Q96Q07 612 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 KRT23Q9C075 422 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 MTMR12Q9C0I1 747 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 NAPBQ9H115 298 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 HIPK2Q9H2X6 1198 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 TMEM245Q9H330 911 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 DPEP3Q9H4B8 488 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 RNF121Q9H920 327 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 SIX2Q9NPC8 291 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 ZCCHC3Q9NUD5 404 aaKnown RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 INTS9Q9NV88 658 aaKnown RBP4.4□□□□□ -1.71
RPL39-201ENST00000361575 ACTR3BQ9P1U1 418 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 UBQLN2Q9UHD9 624 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 PPP2R2CQ9Y2T4 447 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 SPATA31D1Q6ZQQ2 1576 aa4.4□□□□□ -1.71
RPL39-201ENST00000361575 SCN5AQ14524 2016 aa4.39□□□□□ -1.71
RPL39-201ENST00000361575 SERINC4A6NH21 518 aa4.39□□□□□ -1.71
RPL39-201ENST00000361575 GLRA3O75311 464 aa4.39□□□□□ -1.71
RPL39-201ENST00000361575 PTBP3O95758 552 aaKnown RBP4.39□□□□□ -1.71
RPL39-201ENST00000361575 CHRNGP07510 517 aa4.39□□□□□ -1.71
RPL39-201ENST00000361575 YES1P07947 543 aa4.39□□□□□ -1.71
RPL39-201ENST00000361575 MMP10P09238 476 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms