RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SLC25A45Q8N413 288 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 TTLQ8NG68 377 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 CREB3L4Q8TEY5 395 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 EGLN2Q96KS0 407 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 ELF4Q99607 663 aaPredicted RBP16.33■□□□□ 0.21
TPM1-205ENST00000357980 THTPAQ9BU02 230 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 SYNPO2LQ9H987 977 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 WDR41Q9HAD4 459 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 NDE1Q9NXR1 346 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 CSNK1G3Q9Y6M4 447 aa16.33■□□□□ 0.21
TPM1-205ENST00000357980 GOLGA4Q13439 2230 aaKnown RBP16.33■□□□□ 0.21
TPM1-205ENST00000357980 CABIN1Q9Y6J0 2220 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 OR2A25A4D2G3 310 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 CCDC154A6NI56 674 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.2
TPM1-205ENST00000357980 CLEC3AO75596 197 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 GSTM2P28161 218 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 CNR2P34972 360 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 AHRP35869 848 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 C21orf58P58505 322 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.2
TPM1-205ENST00000357980 SLC5A12Q1EHB4 618 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 ZNF528Q3MIS6 628 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 DEPDC1Q5TB30 811 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 KHDRBS2Q5VWX1 349 aaKnown RBP16.33■□□□□ 0.2
TPM1-205ENST00000357980 BMP8AQ7Z5Y6 402 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 SYT12Q8IV01 421 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 ULK2Q8IYT8 1036 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 ARHGAP24Q8N264 748 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 FAM13CQ8NE31 585 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 RSC1A1Q92681 617 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 ROPN1LQ96C74 230 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 CLPTM1LQ96KA5 538 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 ZBTB18Q99592 522 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 ZNF717Q9BY31 904 aaPredicted RBP16.33■□□□□ 0.2
TPM1-205ENST00000357980 HRASLS2Q9NWW9 162 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 PCDHGA4Q9Y5G9 962 aa16.33■□□□□ 0.2
TPM1-205ENST00000357980 LILRA5A6NI73 299 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 PCDH7O60245 1069 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 MYO1DO94832 1006 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 FKBP9O95302 570 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 GIMD1P0DJR0 217 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 MAGP20916 626 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 DPP6P42658 865 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 RAP1GDS1P52306 607 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 CLNS1AP54105 237 aaKnown RBP16.32■□□□□ 0.2
TPM1-205ENST00000357980 ELF3P78545 371 aaPredicted RBP16.32■□□□□ 0.2
TPM1-205ENST00000357980 BNIP3Q12983 259 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 RIPOR1Q6ZS17 1223 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 OOSP2Q86WS3 158 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 PCYOX1LQ8NBM8 494 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 ZBTB44Q8NCP5 570 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 WDR48Q8TAF3 677 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 TESCQ96BS2 214 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 PRM3Q9NNZ6 103 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 EVA1BQ9NVM1 165 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 PCDHGA7Q9Y5G6 932 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 PCDHGA2Q9Y5H1 932 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 AP1M2Q9Y6Q5 423 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 KMT2EQ8IZD2 1858 aa16.32■□□□□ 0.2
TPM1-205ENST00000357980 ARID1BQ8NFD5 2236 aaPredicted RBP16.32■□□□□ 0.2
TPM1-205ENST00000357980 FXYD1O00168 92 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PLPP1O14494 284 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PRMT3O60678 531 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 RASSF9O75901 435 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ANXA4P09525 319 aaPredicted RBP16.31■□□□□ 0.2
TPM1-205ENST00000357980 PRPS1L1P21108 318 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 LSSP48449 732 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
TPM1-205ENST00000357980 DGKQP52824 942 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ZIC1Q15915 447 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 FAM174BQ3ZCQ3 159 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 C14orf28Q4W4Y0 310 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PAGE3Q5JUK9 113 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 SPANXN4Q5MJ08 99 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PGM2L1Q6PCE3 622 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 SCUBE1Q8IWY4 988 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 TBC1D19Q8N5T2 526 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 MFSD9Q8NBP5 474 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■□□□□ 10.4
TPM1-205ENST00000357980 PIGKQ92643 395 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 F2RL3Q96RI0 385 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 AICDAQ9GZX7 198 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ZSCAN32Q9NX65 697 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ANKMY1Q9P2S6 941 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 LEF1Q9UJU2 399 aaPredicted RBP16.31■□□□□ 0.2
TPM1-205ENST00000357980 PRPF19Q9UMS4 504 aaKnown RBP16.31■□□□□ 0.2
TPM1-205ENST00000357980 CROCCQ5TZA2 2017 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 LRIT2A6NDA9 550 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ZW10O43264 779 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 UBXN7O94888 489 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 KLHL18O94889 574 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 IL6P05231 212 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PGRP06401 933 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 TYRP1P17643 537 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 HNRNPH1P31943 449 aaKnown RBP16.31■□□□□ 0.2
TPM1-205ENST00000357980 HOXD12P35452 270 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 PPP1CAP62136 330 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 HYAL2Q12891 473 aa16.31■□□□□ 0.2
TPM1-205ENST00000357980 ADPRMQ3LIE5 342 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms