RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 EVI2BP34910 448 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 OR1E2P47887 323 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 SOX9P48436 509 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 CASP9P55211 416 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 CDH12P55289 794 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 LARS2Q15031 903 aaKnown RBP14.83□□□□□ -0.04
LMNA-201ENST00000347559 CTSL3PQ5NE16 218 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 MARCH8Q5T0T0 291 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 CCDC149Q6ZUS6 474 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 FAM124AQ86V42 546 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 OPALINQ96PE5 141 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 SPATA9Q9BWV2 254 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 HHATLQ9HCP6 504 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 WWOXQ9NZC7 414 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 NUDT4Q9NZJ9 180 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 CLEC2DQ9UHP7 191 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 PCDHGB3Q9Y5G1 929 aa14.83□□□□□ -0.04
LMNA-201ENST00000347559 LOC730098B7Z3J9 87 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 FFAR2O15552 330 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 KCNK5O95279 499 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 NUDT7P0C024 238 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 GLULP15104 373 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 HLA-DPA1P20036 260 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 ENPP1P22413 925 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 CPN2P22792 545 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 APEX1P27695 318 aaKnown RBP14.82□□□□□ -0.04
LMNA-201ENST00000347559 HOXC13P31276 330 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 MAP2K3P46734 347 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 CYP4F8P98187 520 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.041e-8■■■□□ 15.5
LMNA-201ENST00000347559 CDH18Q13634 790 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 SUZ12Q15022 739 aaKnown RBP14.82□□□□□ -0.04
LMNA-201ENST00000347559 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.82□□□□□ -0.042e-8■■■■□ 20.1
LMNA-201ENST00000347559 LRIF1Q5T3J3 769 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 LCN1P1Q5VSP4 162 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 TRIQKQ629K1 86 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 AFMIDQ63HM1 303 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 C16orf62Q7Z3J2 963 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 KCTD20Q7Z5Y7 419 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 OR9Q2Q8NGE9 314 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 MAL2Q969L2 176 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 FKBPLQ9UIM3 349 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 NDRG2Q9UN36 371 aaKnown RBP14.82□□□□□ -0.04
LMNA-201ENST00000347559 ZNF30P17039 623 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 DDCP20711 480 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 HSPA14Q0VDF9 509 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 MAB21L1Q13394 359 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 XKRXQ6PP77 449 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 AFTPHQ6ULP2 937 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 POLR1EQ9GZS1 481 aaKnown RBP14.82□□□□□ -0.04
LMNA-201ENST00000347559 EIF3KQ9UBQ5 218 aaKnown RBP14.82□□□□□ -0.04
LMNA-201ENST00000347559 PPT2Q9UMR5 302 aa14.82□□□□□ -0.04
LMNA-201ENST00000347559 FPGTO14772 594 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 MC4RP32245 332 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 ACVRL1P37023 503 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 SPIBQ01892 262 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 EIF4HQ15056 248 aaKnown RBP14.81□□□□□ -0.04
LMNA-201ENST00000347559 PTCHD4Q6ZW05 846 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 CBLL1Q75N03 491 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 OR9Q1Q8NGQ5 310 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 MIXL1Q9H2W2 232 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 MEIS3P2A8K0S8 358 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 MYL12BO14950 172 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 MYL12AP19105 171 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 PTPN6P29350 595 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 MLLT6P55198 1093 aaPredicted RBP14.81□□□□□ -0.04
LMNA-201ENST00000347559 DSC3Q14574 896 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 GLYR1Q49A26 553 aaPredicted RBP14.81□□□□□ -0.04
LMNA-201ENST00000347559 LIPKQ5VXJ0 399 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 LGI4Q8N135 537 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 SLC37A3Q8NCC5 494 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 ZC4H2Q9NQZ6 224 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 ELOVL2Q9NXB9 296 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 PCDHGA2Q9Y5H1 932 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 PLXNA1Q9UIW2 1896 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 LOC102723532A0A0G2JNH3 316 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 SUV39H1O43463 412 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 SLC22A5O76082 557 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 AFF1P51825 1210 aaKnown RBP14.81□□□□□ -0.04
LMNA-201ENST00000347559 PCBP2Q15366 365 aaKnown RBP eCLIP14.81□□□□□ -0.041e-9■□□□□ 9.8
LMNA-201ENST00000347559 ZBTB37Q5TC79 503 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 ANGPTL8Q6UXH0 198 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 DENND6BQ8NEG7 585 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 C9orf43Q8TAL5 461 aaPredicted RBP14.81□□□□□ -0.04
LMNA-201ENST00000347559 TMEM40Q8WWA1 233 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 SH3KBP1Q96B97 665 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 C1orf74Q96LT6 269 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 COMMD3Q9UBI1 195 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 KCNE2Q9Y6J6 123 aa14.81□□□□□ -0.04
LMNA-201ENST00000347559 OR5K3A6NET4 321 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 MANBAO00462 879 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 HMBSP08397 361 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 LHX1P48742 406 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 INPP1P49441 399 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 CAV3P56539 151 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 MLIPQ5VWP3 458 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 MICALL2Q8IY33 904 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 GPR65Q8IYL9 337 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 HASPINQ8TF76 798 aa14.8□□□□□ -0.04
LMNA-201ENST00000347559 QRFPRQ96P65 431 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms