RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PRKXP51817 358 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 PCDHGA8Q9Y5G5 932 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 SULT1C2O00338 296 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 DNASE1P24855 282 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 ABHD18Q0P651 414 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 HNRNPDQ14103 355 aaKnown RBP18.83■□□□□ 0.6
HDAC4-201ENST00000345617 REEP3Q6NUK4 255 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 LCN9Q8WX39 176 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 HSH2DQ96JZ2 352 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 POLLQ9UGP5 575 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 MANSC4A6NHS7 340 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-201ENST00000345617 RFPL2O75678 378 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 ATE1O95260 518 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 CRISP1P54107 249 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 RAB39AQ14964 217 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 SNX29P2Q8IUI4 249 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM145Q8NBT3 493 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 FANK1Q8TC84 345 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 IL4I1Q96RQ9 567 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 OXSR1O95747 527 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 PAHP00439 452 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SMIM10L2AP0DMW4 78 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SMIM10L2BP0DMW5 78 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 DPYSL2Q16555 572 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 HS3ST5Q8IZT8 346 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SYNPOQ8N3V7 929 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 ARL5AQ9Y689 179 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 F5H0A9 414 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 DNAJB13P59910 316 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 MRPL41Q8IXM3 137 aaKnown RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 OR52E4Q8NGH9 312 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 MFSD1Q9H3U5 465 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 NPIPA5E9PKD4 350 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 APOC3P02656 99 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 MAP2K3P46734 347 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SCNN1GP51170 649 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 CHRFAM7AQ494W8 412 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF529Q6P280 563 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 BEST3Q8N1M1 668 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 MRIQ9BWK5 157 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM185BQ9H7F4 350 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 NPIPA1Q9UND3 350 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 A0A0J9YVX5 310 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 PROM1O43490 865 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 CCND3P30281 292 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 DSC3Q14574 896 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 TBL1XR1Q9BZK7 514 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 GSKIPQ9P0R6 139 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 FBXW2Q9UKT8 454 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 HNRNPFP52597 415 aaKnown RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF169Q14929 603 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SCML4Q8N228 414 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 FAM156AQ8NDB6 213 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 UPF1Q92900 1129 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SLC45A3Q96JT2 553 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 MAGIXQ9H6Y5 334 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 PRKAB1Q9Y478 270 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 TRAV6A0A075B6T7 132 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 PMM2O15305 246 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 CXCR1P25024 350 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SERPINA9Q86WD7 417 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 ALDH16A1Q8IZ83 802 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF675Q8TD23 568 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 SLC16A10Q8TF71 515 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF599Q96NL3 588 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 STUB1Q9UNE7 303 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 NMBRP28336 390 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 UNQ6126/PRO20091Q6UXV3 157 aa18.82■□□□□ 0.6
HDAC4-201ENST00000345617 WDR53Q7Z5U6 358 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-201ENST00000345617 H0YGN5 161 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 RGS9O75916 674 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 RASGRP1O95267 797 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 HRGP04196 525 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 AHCYP23526 432 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 ZBTB7AO95365 584 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 FRG2Q64ET8 278 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 SLC15A3Q8IY34 581 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 FRG2BQ96QU4 278 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 ARHGEF17Q96PE2 2063 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 CAPN5O15484 640 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 HNRNPA0Q13151 305 aaKnown RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 LRRC66Q68CR7 880 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM150BA6NC51 233 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TAS2R50P59544 299 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF33AQ06730 810 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 COMTD1Q86VU5 262 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF283Q8N7M2 679 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 GDPD1Q8N9F7 314 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TMLHEQ9NVH6 421 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 UQCRC1P31930 480 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 CASP9P55211 416 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 SCRN2Q96FV2 425 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM246Q9BRR3 403 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TTYH3Q9C0H2 523 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 ATG10Q9H0Y0 220 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 RAB9BQ9NP90 201 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 PAQR5Q9NXK6 330 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 STXBP5LQ9Y2K9 1186 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 ABCC6O95255 1503 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms