RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SLC17A4Q9Y2C5 497 aa12.37□□□□□ -0.43
CLK3-201ENST00000345005 AP3M1Q9Y2T2 418 aa12.37□□□□□ -0.43
CLK3-201ENST00000345005 CROCCQ5TZA2 2017 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 TCRBV21S2A2A0A5A6 115 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 HTR3EA5X5Y0 456 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 LRRC72A6NJI9 287 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 PRAMEF4O60810 478 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 GMNNO75496 209 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 SEC14L2O76054 403 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 ATE1O95260 518 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 CEACAM5P06731 702 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 S100A1P23297 94 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 PRPH2P23942 346 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 HSD17B2P37059 387 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 TPMTP51580 245 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 GABARAPL2P60520 117 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
CLK3-201ENST00000345005 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 RELAQ04206 551 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 PRKG2Q13237 762 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 RCAN2Q14206 197 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 FXNQ16595 210 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 VPS26BQ4G0F5 336 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 CACHD1Q5VU97 1274 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 PRAMEF9Q5VWM5 478 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 GRHL2Q6ISB3 625 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 CYP20A1Q6UW02 462 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 DCUN1D3Q8IWE4 304 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 SCAIQ8N9R8 606 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 SETD7Q8WTS6 366 aaKnown RBP12.36□□□□□ -0.43
CLK3-201ENST00000345005 HLA-CQ95604 372 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 TMEM125Q96AQ2 219 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 OR4K3Q96R72 315 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 DCUN1D5Q9BTE7 237 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 BTBD1Q9H0C5 482 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 MAGEL2Q9UJ55 1249 aa12.36□□□□□ -0.43
CLK3-201ENST00000345005 POLR3HQ9Y535 204 aaPredicted RBP12.36□□□□□ -0.43
CLK3-201ENST00000345005 NPIPB8E9PQR5 432 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 PI15O43692 258 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 RSL1D1O76021 490 aaKnown RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 ZBTB11O95625 1053 aaPredicted RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 G6PDP11413 515 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 GABRG2P18507 467 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 NELFEP18615 380 aaKnown RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 CAPN3P20807 821 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 CD72P21854 359 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 GSTM2P28161 218 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 BCAP31P51572 246 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 PNLIPRP1P54315 467 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 PPP2CBP62714 309 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 PPP2CAP67775 309 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 NFATC3Q12968 1075 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 NFYCQ13952 458 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 DOC2AQ14183 400 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 ANKRD26P1Q6NSI1 321 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 CHST15Q7LFX5 561 aaPredicted RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 FAM9CQ8IZT9 166 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 PROKR1Q8TCW9 393 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 S100ZQ8WXG8 99 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 CMTM7Q96FZ5 175 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 SCARF2Q96GP6 870 aaPredicted RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 SGPP1Q9BX95 441 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 ACPTQ9BZG2 426 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 SGK2Q9HBY8 427 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 POLMQ9NP87 494 aaPredicted RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 SLC52A3Q9NQ40 469 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 TM7SF3Q9NS93 570 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 NDRG2Q9UN36 371 aaKnown RBP12.35□□□□□ -0.43
CLK3-201ENST00000345005 DYRK1BQ9Y463 629 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 PCDHGA11Q9Y5H2 935 aa12.35□□□□□ -0.43
CLK3-201ENST00000345005 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 FUOMA2VDF0 154 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CCDC154A6NI56 674 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 E7EQ34 232 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 H0YIV9 168 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 EI24O14681 340 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 FPGTO14772 594 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ABCB7O75027 752 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 SERPINB7O75635 380 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CLPXO76031 633 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 FUCA1P04066 466 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 GNAO1P09471 354 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CDH1P12830 882 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 NPPBP16860 134 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 JAK1P23458 1154 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 MAPK1P28482 360 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ZFP36L2P47974 494 aaKnown RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 GSK3BP49841 420 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ALDH3A2P51648 485 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 NEK2P51955 445 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 KIAA1024LP59773 190 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 TBPL1P62380 186 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 KCNC4Q03721 635 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 OCA2Q04671 838 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CSTF3Q12996 717 aaKnown RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 E2F2Q14209 437 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ARHGAP19Q14CB8 494 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms