RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 C1orf52Q8N6N3 182 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 Q96MT0 163 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CCDC177Q9NQR7 707 aaPredicted RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CD84Q9UIB8 345 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PPT2Q9UMR5 302 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 H3BN98 237 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 HOXA2O43364 376 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PRMT3O60678 531 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 MTX2O75431 263 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CKBP12277 381 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PRKAR2AP13861 404 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 INPP1P49441 399 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 ST3GAL4Q11206 333 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 ZFP69Q49AA0 526 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 C10orf62Q5T681 223 aaPredicted RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CBLL1Q75N03 491 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 GDPD3Q7L5L3 318 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 TSPAN33Q86UF1 283 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 GATAD2AQ86YP4 633 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 RNF175Q8N4F7 328 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CELF2-AS1Q8N7Q2 184 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PIK3R3Q92569 461 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 MRPL9Q9BYD2 267 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PRDM8Q9NQV8 689 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 RAD18Q9NS91 495 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 GPR83Q9NYM4 423 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 TBC1D14Q9P2M4 693 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 RAB23Q9ULC3 237 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CFL2Q9Y281 166 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PCDHB11Q9Y5F2 797 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PCDHGB6Q9Y5F9 930 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 GBF1Q92538 1859 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PRRC2BQ5JSZ5 2229 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 KPNA5O15131 536 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 PCDHGA12O60330 932 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 LAMP1P11279 417 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 ATF6P18850 670 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 POLR2EP19388 210 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 MAGEA2P43356 314 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 TBCEQ15813 527 aaPredicted RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 TSTQ16762 297 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 LRRC66Q68CR7 880 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 SPATC1Q76KD6 591 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 NPAS3Q8IXF0 933 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CHPFQ8IZ52 775 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 ASCC1Q8N9N2 400 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 MAL2Q969L2 176 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 ZFYVE19Q96K21 471 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 DEPDC7Q96QD5 511 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 RNF38Q9H0F5 515 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CCDC59Q9P031 241 aaKnown RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 ZNF282Q9UDV7 671 aaPredicted RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 MKLN1Q9UL63 735 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CAB39Q9Y376 341 aaPredicted RBP8.43□□□□□ -1.06
LIMK2-201ENST00000331728 CCL27Q9Y4X3 112 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 MYO16Q9Y6X6 1858 aa8.43□□□□□ -1.06
LIMK2-201ENST00000331728 NOTOA8MTQ0 251 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 TLL1O43897 1013 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CYBAP13498 195 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 AMD1P17707 334 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 TNFRSF1BP20333 461 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 PTX3P26022 381 aaPredicted RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 SLC15A1P46059 708 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 OR1E2P47887 323 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 AP1S2P56377 157 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 PPIGQ13427 754 aaKnown RBP eCLIP8.42□□□□□ -1.061e-7■■□□□ 13.4
LIMK2-201ENST00000331728 C1DQ13901 141 aaKnown RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 STARD3Q14849 445 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CXorf57Q6NSI4 855 aaKnown RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 TTC23LQ6PF05 361 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 ENTHD1Q8IYW4 607 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 C10orf111Q8N326 155 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 SLC5A8Q8N695 610 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 C9orf43Q8TAL5 461 aaPredicted RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 PIH1D2Q8WWB5 315 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 TBC1D20Q96BZ9 403 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CLSTN3Q9BQT9 956 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 OR51E2Q9H255 320 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 RGS17Q9UGC6 210 aaPredicted RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 ANGPT4Q9Y264 503 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 MAP4K5Q9Y4K4 846 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 DOCK4Q8N1I0 1966 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 C2orf78A6NCI8 922 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CLCA1A8K7I4 914 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CENPXA8MT69 81 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 TFECO14948 347 aaPredicted RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 KCNK5O95279 499 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 SLC14A1Q13336 389 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 SPDYE7PQ495Y7 208 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 HIST2H2AA3Q6FI13 130 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 TRIM40Q6P9F5 258 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CASP12Q6UXS9 341 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 ZNF783Q6ZMS7 281 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 RAVER1Q8IY67 606 aaKnown RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 ARL14EPQ8N8R7 260 aaPredicted RBP8.42□□□□□ -1.06
LIMK2-201ENST00000331728 ASZ1Q8WWH4 475 aa8.42□□□□□ -1.06
LIMK2-201ENST00000331728 CRELD1Q96HD1 420 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms