RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 SLC13A3Q8WWT9 602 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 ANKRD7Q92527 254 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 CYTH2Q99418 400 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 VN1R1Q9GZP7 353 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 CCDC188H7C350 402 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 BANF1O75531 89 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 UQCRHP07919 91 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 ARL4CP56559 192 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 DR1Q01658 176 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 HERC3Q15034 1050 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 HIBCHQ6NVY1 386 aaPredicted RBP17.13■□□□□ 0.33
RAB28-202ENST00000330852 MAMDC2Q7Z304 686 aaPredicted RBP17.13■□□□□ 0.33
RAB28-202ENST00000330852 CPEB2Q7Z5Q1 589 aaKnown RBP17.13■□□□□ 0.33
RAB28-202ENST00000330852 GPATCH11Q8N954 259 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 CATSPER1Q8NEC5 780 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 FBXL8Q96CD0 374 aa17.13■□□□□ 0.33
RAB28-202ENST00000330852 RNF224P0DH78 156 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 CDH1P12830 882 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 XCR1P46094 333 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 PER3P56645 1201 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 PWP1Q13610 501 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 ABHD17BQ5VST6 288 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 PLAG1Q6DJT9 500 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 MBOAT1Q6ZNC8 495 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 SLC26A11Q86WA9 606 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 CREG2Q8IUH2 290 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 SIRT6Q8N6T7 355 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 ALKBH8Q96BT7 664 aaKnown RBP17.12■□□□□ 0.33
RAB28-202ENST00000330852 SNF8Q96H20 258 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 OR1F2PQ96R84 312 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 SLX1AQ9BQ83 275 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 KCNF1Q9H3M0 494 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 PLAC1Q9HBJ0 212 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 RNF14Q9UBS8 474 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 CHMP2BQ9UQN3 213 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 SAR1BQ9Y6B6 198 aa17.12■□□□□ 0.33
RAB28-202ENST00000330852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
RAB28-202ENST00000330852 TRBC2A0A5B9 178 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 E2F3O00716 465 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 LCMT2O60294 686 aaKnown RBP17.11■□□□□ 0.33
RAB28-202ENST00000330852 IL1RNP18510 177 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 CBLBQ13191 982 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 MINDY4Q4G0A6 757 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 CFAP36Q96G28 342 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 CLK4Q9HAZ1 481 aaKnown RBP17.11■□□□□ 0.33
RAB28-202ENST00000330852 OLAHQ9NV23 265 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 SH2B3Q9UQQ2 575 aa17.11■□□□□ 0.33
RAB28-202ENST00000330852 ITGAMP11215 1152 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 PAFAH1B1P43034 410 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 MGAT5Q09328 741 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 MFSD4BQ5TF39 518 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 TRMT10BQ6PF06 316 aaKnown RBP17.1■□□□□ 0.33
RAB28-202ENST00000330852 KLHL7Q8IXQ5 586 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 AFAP1L2Q8N4X5 818 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 NKAPQ8N5F7 415 aaKnown RBP17.1■□□□□ 0.33
RAB28-202ENST00000330852 KCT2Q8NC54 265 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 PLPP5Q8NEB5 264 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 DNAJB8Q8NHS0 232 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 SUN3Q8TAQ9 357 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 NSMCE4AQ9NXX6 385 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 ZFATQ9P243 1243 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 CACNA1DQ01668 2161 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 SGK494L7N484 410 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 JRKO75564 520 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 SEC31AO94979 1220 aaKnown RBP17.1■□□□□ 0.33
RAB28-202ENST00000330852 STATHP02808 62 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 AHRP35869 848 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 GNG11P61952 73 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 CSHL1Q14406 222 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 EXT1Q16394 746 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 ZXDCQ2QGD7 858 aaPredicted RBP17.1■□□□□ 0.33
RAB28-202ENST00000330852 ZNF324BQ6AW86 544 aaPredicted RBP17.1■□□□□ 0.33
RAB28-202ENST00000330852 H3F3CQ6NXT2 135 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 PRSS41Q7RTY9 318 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 CAPZA3Q96KX2 299 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 ZNF354BQ96LW1 612 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
RAB28-202ENST00000330852 MACROD1Q9BQ69 325 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.1■□□□□ 0.33
RAB28-202ENST00000330852 PLA2G3Q9NZ20 509 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 STMN3Q9NZ72 180 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 HCN3Q9P1Z3 774 aa17.1■□□□□ 0.33
RAB28-202ENST00000330852 UNC79Q9P2D8 2635 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 OR5H15A6NDH6 313 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 CDK2AP1O14519 115 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 OR1F1O43749 312 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 CRYABP02511 175 aaKnown RBP17.09■□□□□ 0.33
RAB28-202ENST00000330852 EFNA3P52797 238 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 ITGA8P53708 1063 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 CDKL1Q00532 357 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 RGS1Q08116 209 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 SBSNQ6UWP8 590 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 ZCCHC10Q8TBK6 192 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 M1APQ8TC57 530 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 SLC5A11Q8WWX8 675 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 PYCR2Q96C36 320 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 OR4K3Q96R72 315 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 OLFM1Q99784 485 aa17.09■□□□□ 0.33
RAB28-202ENST00000330852 MOCS1Q9NZB8 636 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms