RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 NMBRP28336 390 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SLC9A3P48764 834 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TAF1AQ15573 450 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 C2orf76Q3KRA6 126 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 LINC00471Q8N535 108 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF514Q96K75 400 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 RNF38Q9H0F5 515 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 GOLGA2P5Q9HBQ8 144 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ASB6Q9NWX5 421 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SLC7A11Q9UPY5 501 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CNTN6Q9UQ52 1028 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CMAHPQ9Y471 501 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF175Q9Y473 711 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 PCDHGA8Q9Y5G5 932 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TRBC2A0A5B9 178 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SOX1O00570 391 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 LILRB5O75023 590 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 PSMD10O75832 226 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 RPS3P23396 243 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF460Q14592 562 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 BATFQ16520 125 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 GARNL3Q5VVW2 1013 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SLC39A4Q6P5W5 647 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TCEAL4Q96EI5 215 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SYT4Q9H2B2 425 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 C19orf25Q9UFG5 118 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CPQQ9Y646 472 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TRAV6A0A075B6T7 132 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 A6NLC8 198 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 LRRN3E7EW58 273 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 GABBR2O75899 941 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CTBP2P56545 445 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TAS2R43P59537 309 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 BTBD16Q32M84 506 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 FSTL4Q6MZW2 842 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TMCO2Q7Z6W1 182 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SLC22A16Q86VW1 577 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ELMOD2Q8IZ81 293 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 ELP5Q8TE02 316 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 DQX1Q8TE96 717 aaKnown RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 FCAMRQ8WWV6 532 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 LRRN3Q9H3W5 708 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 DENND2DQ9H6A0 471 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-201ENST00000302528 C19orf12Q9NSK7 152 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 CDH10Q9Y6N8 788 aa10.1□□□□□ -0.79
CLIP1-201ENST00000302528 SRPRAP08240 638 aaKnown RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CD3GP09693 182 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 F8A1P23610 371 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CCND3P30281 292 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 FOXK1P85037 733 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 MFSD13AQ14CX5 517 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 LRRC73Q5JTD7 316 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 GLT8D1Q68CQ7 371 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 XYLT1Q86Y38 959 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ARHGAP12Q8IWW6 846 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 OR8K3Q8NH51 312 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 NSMAFQ92636 917 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 RHBDF1Q96CC6 855 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 TMEM185BQ9H7F4 350 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ICKQ9UPZ9 632 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 YARS2Q9Y2Z4 477 aaKnown RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 MPPED1O15442 326 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 RNF13O43567 381 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ECI2O75521 394 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ENGP17813 658 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 FASLGP48023 281 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 NFATC2Q13469 925 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 DEFB115Q30KQ5 88 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 PIAS4Q8N2W9 510 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 BOLLQ8N9W6 283 aaKnown RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 GLIS3Q8NEA6 775 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 HMGB4Q8WW32 186 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 GATA5Q9BWX5 397 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 OSBPL2Q9H1P3 480 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 C12orf65Q9H3J6 166 aaKnown RBP10.09□□□□□ -0.79
CLIP1-201ENST00000302528 NANSQ9NR45 359 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UTS2RQ9UKP6 389 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ERVK-19Q9WJR5 959 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 GRXCR1A8MXD5 290 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 PROM1O43490 865 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A9O60656 530 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 SELPP16109 830 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A6P19224 532 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A1P22309 533 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 UGT1A4P22310 534 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 NDST2P52849 883 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 NUDT6P53370 316 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 CASP6P55212 293 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 COL28A1Q2UY09 1125 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 PRAMEF14Q5SWL7 426 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 PRAMEF13Q5VWM6 474 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ANKRD23Q86SG2 305 aa10.09□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF584Q8IVC4 421 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms