RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ANKRD33BA6NCL7 494 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 NPIPB8E9PQR5 432 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 MANBAO00462 879 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CLGNO14967 610 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 KDM1AO60341 852 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 GNAO1P09471 354 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 IL1RNP18510 177 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CD6P30203 668 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 RABIFP47224 123 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 RPL38P63173 70 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 NHLH1Q02575 133 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CSTF1Q05048 431 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CHRNB3Q05901 458 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 PCDH1Q08174 1060 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 EPS8Q12929 822 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ARHGAP19Q14CB8 494 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 SPEM1Q8N4L4 309 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 L3MBTL4Q8NA19 623 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ZNF420Q8TAQ5 688 aaPredicted RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CYGBQ8WWM9 190 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 GTF2H4Q92759 462 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CNDP2Q96KP4 475 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 PPM1MQ96MI6 270 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 WDR92Q96MX6 357 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 TRIM8Q9BZR9 551 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 DPY30Q9C005 99 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ZDHHC5Q9C0B5 715 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 PCED1AQ9H1Q7 454 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 TRIT1Q9H3H1 467 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 LRTM1Q9HBL6 345 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 FZD3Q9NPG1 666 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 WSB2Q9NYS7 404 aaPredicted RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 SLC23A2Q9UGH3 650 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 MOSPD1Q9UJG1 213 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 PRKAB1Q9Y478 270 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 KCNE2Q9Y6J6 123 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 SERTM1A2A2V5 107 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 SCELO95171 688 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 SLC16A8O95907 504 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 PRPH2P23942 346 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 BDKRB1P46663 353 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ALDH3A2P51648 485 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 PFN3P60673 137 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ATG9BQ674R7 924 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 FAM83HQ6ZRV2 1179 aaPredicted RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 THOC6Q86W42 341 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CAMKK1Q8N5S9 505 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ZNF548Q8NEK5 533 aaPredicted RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 OR2T12Q8NG77 320 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 OR5K2Q8NHB8 316 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 SETD7Q8WTS6 366 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 TOE1Q96GM8 510 aaKnown RBP16.18■□□□□ 0.18
CPSF4-201ENST00000292476 RNF145Q96MT1 663 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ZNF583Q96ND8 569 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 IER2Q9BTL4 223 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ATG10Q9H0Y0 220 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 C1orf109Q9NX04 203 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 CYP8B1Q9UNU6 501 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 GPSM3Q9Y4H4 160 aa16.18■□□□□ 0.18
CPSF4-201ENST00000292476 ZFC3H1O60293 1989 aaKnown RBP16.17■□□□□ 0.18
CPSF4-201ENST00000292476 PRSS38A1L453 326 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 C10orf142B7Z368 130 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 RSL1D1O76021 490 aaKnown RBP16.17■□□□□ 0.18
CPSF4-201ENST00000292476 ALBP02768 609 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 SP9P0CG40 484 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 ACP5P13686 325 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 IMPA1P29218 277 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 CXCL12P48061 93 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 PNLIPRP1P54315 467 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 CYP4F3Q08477 520 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 NAE1Q13564 534 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 DAG1Q14118 895 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 MAPKAPK3Q16644 382 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 IMPG1Q17R60 797 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 CCNYL2Q5T2Q4 361 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 C10orf62Q5T681 223 aaPredicted RBP16.17■□□□□ 0.18
CPSF4-201ENST00000292476 DHRS4L2Q6PKH6 230 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 MSANTD1Q6ZTZ1 278 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 SYTL1Q8IYJ3 562 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 SVOPLQ8N434 492 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 MED8Q96G25 268 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 VPS50Q96JG6 964 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 OR2M4Q96R27 311 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 PHOX2BQ99453 314 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 TUBA1CQ9BQE3 449 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 MAGIXQ9H6Y5 334 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 PRMT8Q9NR22 394 aaPredicted RBP16.17■□□□□ 0.18
CPSF4-201ENST00000292476 SPATA7Q9P0W8 599 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 KLQ9UEF7 1012 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 ZNF490Q9ULM2 529 aaPredicted RBP16.17■□□□□ 0.18
CPSF4-201ENST00000292476 MAN2B2Q9Y2E5 1009 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 HEBP2Q9Y5Z4 205 aa16.17■□□□□ 0.18
CPSF4-201ENST00000292476 TRBV5-3A0A0A0MS03 114 aa16.16■□□□□ 0.18
CPSF4-201ENST00000292476 POM121BA6NF01 834 aa16.16■□□□□ 0.18
CPSF4-201ENST00000292476 FAM220BPB1ANY3 271 aa16.16■□□□□ 0.18
CPSF4-201ENST00000292476 UPK1AO00322 258 aa16.16■□□□□ 0.18
CPSF4-201ENST00000292476 ERN1O75460 977 aaKnown RBP16.16■□□□□ 0.18
CPSF4-201ENST00000292476 RETP07949 1114 aa16.16■□□□□ 0.18
CPSF4-201ENST00000292476 PRPS2P11908 318 aa16.16■□□□□ 0.18
CPSF4-201ENST00000292476 HNF4AP41235 474 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms