RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 BMP2P12643 396 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 BCKDHAP12694 445 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 MSH3P20585 1137 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 CD247P20963 164 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 NXPH1P58417 271 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 TBPL1P62380 186 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 POU4F1Q01851 419 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ANO4Q32M45 955 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 PLK5Q496M5 336 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 GGTA1PQ4G0N0 100 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 HHATQ5VTY9 493 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 CDCP2Q5VXM1 449 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 PMS2CLQ68D20 193 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ITPRIPL1Q6GPH6 555 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 KLC3Q6P597 504 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 BCAS4Q8TDM0 211 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 MS4A6EQ96DS6 147 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 FOPNLQ96NB1 174 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF382Q96SR6 550 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 CPPED1Q9BRF8 314 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 SPON2Q9BUD6 331 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 OR2AG1Q9H205 316 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ASIC5Q9NY37 505 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 BAG5Q9UL15 447 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 EBAG9O00559 213 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 SERPINF2P08697 491 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 LINC00032P0C843 101 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 CLCN2P51788 898 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 VLDLRP98155 873 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 CLCQ05315 142 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 RPE65Q16518 533 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 XAF1Q6GPH4 301 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ASCL5Q7RTU5 278 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 RNF144BQ7Z419 303 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 NLGN4XQ8N0W4 816 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 HUS1BQ8NHY5 278 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 INPP5DQ92835 1189 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 TM4SF18Q96CE8 201 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 HEPHQ9BQS7 1158 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF426Q9BUY5 554 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 TM9SF3Q9HD45 589 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 BCCIPQ9P287 314 aaKnown RBP eCLIP5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 VPS9D1Q9Y2B5 631 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 PRSS38A1L453 326 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 NEMP1O14524 444 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 DCXO43602 365 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 POP4O95707 220 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 TNFRSF1BP20333 461 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 PKLRP30613 574 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ATP6V1E1P36543 226 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 EIF3BP55884 814 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 PPP1R8Q12972 351 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 WLSQ5T9L3 541 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 Q6ZPA2 131 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 NLRP9Q7RTR0 991 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ZNF398Q8TD17 642 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 EDAQ92838 391 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 GATA6Q92908 595 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 NUDT22Q9BRQ3 303 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC17A9Q9BYT1 436 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 FOXP3Q9BZS1 431 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 NOL11Q9H8H0 719 aaKnown RBP5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 CATSPERZQ9NTU4 200 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ZDHHC3Q9NYG2 299 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 DCTN4Q9UJW0 460 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 ROS1P08922 2347 aa5.34□□□□□ -1.55
TOPBP1-201ENST00000260810 TLDC2A0PJX2 215 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 METTL12A8MUP2 240 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 FFAR3O14843 346 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 GPR42O15529 346 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 FCMRO60667 390 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 FCN3O75636 299 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 PDGFAP04085 211 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 PMLP29590 882 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 CD79BP40259 229 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 CLCNKAP51800 687 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 STX1BP61266 288 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 IGLV3-21P80748 117 aaPredicted RBP5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 LTBQ06643 244 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 NKAIN2Q5VXU1 208 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 OR52E8Q6IFG1 317 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 SEZ6L2Q6UXD5 910 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 FGD2Q7Z6J4 655 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 EFHD1Q9BUP0 239 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 QRSL1Q9H0R6 528 aaKnown RBP5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 REV1Q9UBZ9 1251 aa5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 RP1L1Q8IWN7 2480 aaPredicted RBP5.34□□□□□ -1.56
TOPBP1-201ENST00000260810 HEATR9A2RTY3 570 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 C5orf63A6NC05 138 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KRT36O76013 467 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PYGLP06737 847 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 POLBP06746 335 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 GFAPP14136 432 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RPS4Y1P22090 263 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PCSK6P29122 969 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 GCKP35557 465 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 KCNJ10P78508 379 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 PSG6Q00889 435 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 EGR4Q05215 589 aa5.33□□□□□ -1.56
TOPBP1-201ENST00000260810 RNF187Q5TA31 235 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms