RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ZNF599Q96NL3 588 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 UCN2Q96RP3 112 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RAD9AQ99638 391 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 LHPPQ9H008 270 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 CDC42EP4Q9H3Q1 356 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 METTL8Q9H825 291 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 IL26Q9NPH9 171 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 GFOD1Q9NXC2 390 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 C3orf18Q9UK00 162 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 GJD2Q9UKL4 321 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 AKAP11Q9UKA4 1901 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 A0A0U1RQS6 177 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 A0A1W2PPC1 479 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PRAMEF22A3QJZ6 481 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 CXorf65A6NEN9 183 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ASB14A6NK59 587 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 AQP12BA6NM10 295 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 M0QZK8 103 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 LRRTM2O43300 516 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SUV39H1O43463 412 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 MAFKO60675 156 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 WBP4O75554 376 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RPP40O75818 363 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ONECUT2O95948 504 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PNPP00491 289 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 APOC3P02656 99 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ERCC1P07992 297 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 GJB1P08034 283 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SUPT20HL2P0C7V6 817 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 HSD3B1P14060 373 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RPS3P23396 243 aaKnown RBP eCLIP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 FEN1P39748 380 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 NR0B1P51843 470 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SELENOVP59797 346 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 TNK2Q07912 1038 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RASGEF1BQ0VAM2 473 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ECH1Q13011 328 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 P2RY14Q15391 338 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 FAM74A1Q5RGS3 127 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PRAMEF19Q5SWL8 479 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 DMRTA1Q5VZB9 504 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ANKRD54Q6NXT1 300 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PNCKQ6P2M8 343 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SCARA5Q6ZMJ2 495 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 NRARPQ7Z6K4 114 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 CDK20Q8IZL9 346 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 GCNT2Q8N0V5 402 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 STK40Q8N2I9 435 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM145Q8NBT3 493 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RDM1Q8NG50 284 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ACTL9Q8TC94 416 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 CHTF18Q8WVB6 975 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF516Q92618 1163 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 TFAP2CQ92754 450 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SLC45A3Q96JT2 553 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 KCNK16Q96T55 309 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 C11orf84Q9BUA3 381 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 TSSK1BQ9BXA7 367 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 AMNQ9BXJ7 453 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 GSX2Q9BZM3 304 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 POFUT1Q9H488 388 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 REEP4Q9H6H4 257 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ANKHQ9HCJ1 492 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 NCDNQ9UBB6 729 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PCDHA6Q9UN73 950 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 CTNND2Q9UQB3 1225 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PIN4Q9Y237 131 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ATF5Q9Y2D1 282 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PCDHA8Q9Y5H6 950 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 KLK4Q9Y5K2 254 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 HEG1Q9ULI3 1381 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 A0A0U1RQK1 487 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PRSS51A0A1B0GVH4 220 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF320A2RRD8 509 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TUBAL3A6NHL2 446 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PP2D1A8MPX8 630 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TBC1D4O60343 1298 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RECQL5O94762 991 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CTDNEP1O95476 244 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CST3P01034 146 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 C2P06681 752 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ATXN1LP0C7T5 689 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PVALBP20472 110 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DTYMKP23919 212 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 GMPRP36959 345 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CEACAM6P40199 344 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CAPZBP47756 277 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 FMO5P49326 533 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 HLCSP50747 726 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 MECP2P51608 486 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RAB2AP61019 212 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ITKQ08881 620 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 BST1Q10588 318 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SKP2Q13309 424 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 GK2Q14410 553 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CNN3Q15417 329 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CTF1Q16619 201 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms