RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NR4A2P43354 598 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 MAGEA8P43361 318 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 MVKQ03426 396 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 PPIGQ13427 754 aaKnown RBP eCLIP4.58□□□□□ -1.68
USP44-201ENST00000258499 NCF4Q15080 339 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CAPN13Q6MZZ7 669 aaPredicted RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 MED27Q6P2C8 311 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 USP43Q70EL4 1123 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 TSPYL5Q86VY4 417 aaPredicted RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 RNF130Q86XS8 419 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 VRK3Q8IV63 474 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 KLHDC8BQ8IXV7 354 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 NLGN4XQ8N0W4 816 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 C10orf111Q8N326 155 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 DNAJB8Q8NHS0 232 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 RAB8BQ92930 207 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 EXOSC8Q96B26 276 aaKnown RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 C1GALT1C1Q96EU7 318 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 OTUB1Q96FW1 271 aaPredicted RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 PRRG3Q9BZD7 231 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 NECTIN3Q9NQS3 549 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 KLHL20Q9Y2M5 609 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CFAP20Q9Y6A4 193 aaKnown RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 WDR81Q562E7 1941 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 SAGE2PA6NJ88 616 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 FADS2P1A8MWK0 482 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CCL16O15467 120 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 SGTAO43765 313 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 SLC28A2O43868 658 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ADAM23O75077 832 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ATG13O75143 517 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ADAMTS4O75173 837 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CCNB2O95067 398 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 POP4O95707 220 aaKnown RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 SLC16A8O95907 504 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 TSPAN19P0C672 248 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 GSTT2P0CG29 244 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 GSTT2BP0CG30 244 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 MYL12AP19105 171 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 IFNA8P32881 189 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 RFX3P48380 749 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CLK3P49761 638 aaKnown RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 HNMTP50135 292 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 PTPN5P54829 565 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 TAS2R50P59544 299 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 PHC1P78364 1004 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 OLR1P78380 273 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CDK6Q00534 326 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 SLC14A1Q13336 389 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 EIF4EBP2Q13542 120 aaPredicted RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 TEAD4Q15561 434 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 EXOC3L2Q2M3D2 409 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ARSIQ5FYB1 569 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ZNF697Q5TEC3 545 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 IRAK1BP1Q5VVH5 260 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 DHRS4L2Q6PKH6 230 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 MSRB3Q8IXL7 192 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CADM3Q8N126 398 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CACTIN-AS1Q8N1I8 211 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CHST14Q8NCH0 376 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ENKURQ8TC29 256 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ADAMTS16Q8TE57 1224 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 DNASE1L2Q92874 299 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 EID2BQ96D98 161 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 ZIC5Q96T25 663 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 NTMT1Q9BV86 223 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 P2RY12Q9H244 342 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 MAGIXQ9H6Y5 334 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 RNF167Q9H6Y7 350 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CAPN10Q9HC96 672 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 TIGARQ9NQ88 270 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 GIMAP4Q9NUV9 329 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 FAM120CQ9NX05 1096 aaKnown RBP4.58□□□□□ -1.68
USP44-201ENST00000258499 TVP23BQ9NYZ1 205 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 PPT2Q9UMR5 302 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 CORO2BQ9UQ03 480 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 PRKAB1Q9Y478 270 aa4.58□□□□□ -1.68
USP44-201ENST00000258499 A0A1W2PRB8 838 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 TRBC2A0A5B9 178 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 GRXCR2A6NFK2 248 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 CENPXA8MT69 81 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 SCAMP1O15126 338 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 CA12O43570 354 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 KLK8O60259 260 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 PCDHGA12O60330 932 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 WISP3O95389 354 aaPredicted RBP4.57□□□□□ -1.68
USP44-201ENST00000258499 CAPNS1P04632 268 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 NR2F1P10589 423 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 ANXA8P13928 327 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 ACPPP15309 386 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 JUNBP17275 347 aaPredicted RBP4.57□□□□□ -1.68
USP44-201ENST00000258499 PSMA1P25786 263 aaKnown RBP4.57□□□□□ -1.68
USP44-201ENST00000258499 RYKP34925 604 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 BUD31P41223 144 aaPredicted RBP4.57□□□□□ -1.68
USP44-201ENST00000258499 GPR1P46091 355 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 PPP5CP53041 499 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 AP1S2P56377 157 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 MC1RQ01726 317 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 MBTPS1Q14703 1052 aa4.57□□□□□ -1.68
USP44-201ENST00000258499 PROX2Q3B8N5 592 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms