RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 A0A1B0GWJ7 208 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 MFSD2BA6NFX1 497 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ISM1B1AKI9 464 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TSPAN6O43657 245 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CLN5O75503 358 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNK2O95069 426 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ICAM2P13598 275 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CD19P15391 556 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 HMGCS2P54868 508 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 WDR4P57081 412 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RHDQ02161 417 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PRKCDQ05655 676 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 EIF4HQ15056 248 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RAB11BQ15907 218 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 N4BP2L1Q5TBK1 243 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 BLOC1S3Q6QNY0 202 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 IL20RBQ6UXL0 311 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 MOB1BQ7L9L4 216 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PHACTR4Q8IZ21 702 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 OR2L2Q8NH16 312 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ERVK13-1Q9NX77 482 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CSNK1G3Q9Y6M4 447 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TVP23AA6NH52 213 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC16A3O15427 465 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 HCN1O60741 890 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ITGA10O75578 1167 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LYPLA1O75608 230 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 NCF1P14598 390 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CHRM3P20309 590 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 GZMKP49863 264 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ROR1Q01973 937 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ST3GAL1Q11201 340 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 VAMP3Q15836 100 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 DNAJC24Q6P3W2 148 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PET117Q6UWS5 81 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CES3Q6UWW8 571 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TAS1R3Q7RTX0 852 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 REC114Q7Z4M0 266 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CARM1Q86X55 608 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 DNAJC22Q8N4W6 341 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 DCLRE1CQ96SD1 692 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SMURF1Q9HCE7 757 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ACOXLQ9NUZ1 547 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 VWA7Q9Y334 891 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 AFDNP55196 1824 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TRBV23-1A0A0A0MS06 115 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 A0A0A6YYJ9 748 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 BTNL10A8MVZ5 291 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SEC14L6B5MCN3 397 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 STK25O00506 426 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PHOX2AO14813 284 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PPM1DO15297 605 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 BCAS2O75934 225 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TOXO94900 526 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LATS1O95835 1130 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CST1P01037 141 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RAF1P04049 648 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 FBP1P09467 338 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RFC2P35250 354 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CEBPDP49716 269 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNC4Q03721 635 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF273Q14593 569 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TTLL4Q14679 1199 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LIPJQ5W064 366 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 FUT10Q6P4F1 479 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 UBAC2Q8NBM4 344 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 STON2Q8WXE9 905 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LIN37Q96GY3 246 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LRIG1Q96JA1 1093 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 AGPAT1Q99943 283 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF649Q9BS31 505 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LXNQ9BS40 222 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 BCL2L14Q9BZR8 327 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM39BQ9GZU3 492 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 OR51B6Q9H340 312 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LDAHQ9H6V9 325 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 NT5DC2Q9H857 520 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PLSCR3Q9NRY6 295 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 USP36Q9P275 1121 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LRP6O75581 1613 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 AQP12BA6NM10 295 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TREHO43280 583 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 F10P00742 488 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 OR4E1P0C645 316 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PRF1P14222 555 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 MAN2A2P49641 1150 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 RPL14P50914 215 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ARHGEF7Q14155 803 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PFKFB4Q16877 469 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TCEAL5Q5H9L2 206 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 IDNKQ5T6J7 187 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 VN1R5Q7Z5H4 357 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ARHGAP12Q8IWW6 846 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 AQP12AQ8IXF9 295 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 KATNAL2Q8IYT4 538 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 C9orf43Q8TAL5 461 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SLAMF9Q96A28 289 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms