RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 UGT2B11O75310 529 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 C1QCP02747 245 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 LAMP1P11279 417 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 NR1D2Q14995 579 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 GAB4Q2WGN9 574 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 SPIN4Q56A73 249 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 ADNP2Q6IQ32 1131 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 CRTC3Q6UUV7 619 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 PTOV1Q86YD1 416 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 CPA6Q8N4T0 437 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 C1orf52Q8N6N3 182 aaKnown RBP21.12■□□□□ 0.97
RNF39-201ENST00000244360 HUS1BQ8NHY5 278 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 NEIL2Q969S2 332 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 NUS1Q96E22 293 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 CSF3RQ99062 836 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 BTNL2Q9UIR0 455 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 BTBD3Q9Y2F9 522 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 EDDM13A0A1B0GTR0 161 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 BCKDKO14874 412 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 SEMG1P04279 462 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 PHEXP78562 749 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 CLECL1Q8IZS7 167 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 SLC15A4Q8N697 577 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 OR8D1Q8WZ84 308 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 HERVK_113Q902F9 699 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 DPP7Q9UHL4 492 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 ERGIC3Q9Y282 383 aa21.12■□□□□ 0.97
RNF39-201ENST00000244360 K7ESM1 405 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 M0QX08 132 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 PCMT1P22061 227 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 VIPR2P41587 438 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 TBPL1P62380 186 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 DPTQ07507 201 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 RGS21Q2M5E4 152 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 C10orf62Q5T681 223 aaPredicted RBP21.11■□□□□ 0.97
RNF39-201ENST00000244360 CAPN13Q6MZZ7 669 aaPredicted RBP21.11■□□□□ 0.97
RNF39-201ENST00000244360 ZCCHC8Q6NZY4 707 aaKnown RBP21.11■□□□□ 0.97
RNF39-201ENST00000244360 MED27Q6P2C8 311 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 CENPSQ8N2Z9 138 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 LINC00615Q96LM1 132 aaPredicted RBP21.11■□□□□ 0.97
RNF39-201ENST00000244360 DUSP26Q9BV47 211 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 SGPP1Q9BX95 441 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 SIRT5Q9NXA8 310 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 TMEFF2Q9UIK5 374 aaPredicted RBP21.11■□□□□ 0.97
RNF39-201ENST00000244360 PCDHB11Q9Y5F2 797 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 LRRK1Q38SD2 2015 aa21.11■□□□□ 0.97
RNF39-201ENST00000244360 ZNF99A8MXY4 864 aaPredicted RBP21.1■□□□□ 0.97
RNF39-201ENST00000244360 TFPTP0C1Z6 253 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 ARHGDIAP52565 204 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 OCA2Q04671 838 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 FNDC3BQ53EP0 1204 aaKnown RBP21.1■□□□□ 0.97
RNF39-201ENST00000244360 LAIR2Q6ISS4 152 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 ZNF621Q6ZSS3 439 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 TRIM74Q86UV6 250 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 ZDHHC21Q8IVQ6 265 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 COQ8BQ96D53 544 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 REPS1Q96D71 796 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 ZNF347Q96SE7 839 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 SPATA9Q9BWV2 254 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 OR2AG1Q9H205 316 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 WBP1LQ9NX94 342 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 NDUFS2O75306 463 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 BCAS1O75363 584 aaPredicted RBP21.1■□□□□ 0.97
RNF39-201ENST00000244360 SULT1C4O75897 302 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 PAPLNO95428 1278 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 ANXA4P09525 319 aaPredicted RBP21.1■□□□□ 0.97
RNF39-201ENST00000244360 C6P13671 934 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 AGXTP21549 392 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 TIA1P31483 386 aaKnown RBP eCLIP21.1■□□□□ 0.97
RNF39-201ENST00000244360 SLC6A11P48066 632 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 ZNF846Q147U1 533 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 SF1Q15637 639 aaKnown RBP21.1■□□□□ 0.97
RNF39-201ENST00000244360 ANKRD34AQ69YU3 496 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 SLC16A12Q6ZSM3 486 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 CFAP206Q8IYR0 622 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 PARP8Q8N3A8 854 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 SGCDQ92629 289 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 SH3KBP1Q96B97 665 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 DGCR6LQ9BY27 220 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 IL1RAPQ9NPH3 570 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 VNN3Q9NY84 501 aa21.1■□□□□ 0.97
RNF39-201ENST00000244360 GABRR3A8MPY1 467 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 HLA-EP13747 358 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 NPPBP16860 134 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 IGFBP5P24593 272 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 HTR1BP28222 390 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 CDK5R2Q13319 367 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 KEAP1Q14145 624 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 ELAVL3Q14576 367 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 EIF4HQ15056 248 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 TMPRSS11BQ86T26 416 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 TRAPPC5Q8IUR0 188 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 PIK3C3Q8NEB9 887 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 ZNF514Q96K75 400 aaPredicted RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 WDR12Q9GZL7 423 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 CHST8Q9H2A9 424 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 EHD1Q9H4M9 534 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 RPS6KA6Q9UK32 745 aa21.09■□□□□ 0.97
RNF39-201ENST00000244360 TCF20Q9UGU0 1960 aaKnown RBP21.09■□□□□ 0.97
RNF39-201ENST00000244360 C17orf113A0A1B0GUU1 675 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms