RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TGFBIQ15582 683 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 IER5LQ5T953 404 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 OR2T5Q6IEZ7 315 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 TCEAL6Q6IPX3 200 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 CCDC80Q76M96 950 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 CEP97Q8IW35 865 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 HOMEZQ8IX15 550 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 TCEANCQ8N8B7 351 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 OR2T29Q8NH02 315 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 CASTOR1Q8WTX7 329 aa13.21□□□□□ -0.3
TGFBR3-201ENST00000212355 A0A1B0GV50 99 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 A0A1W2PRQ8 180 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 E7EQ34 232 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 POP7O75817 140 aaKnown RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 VAMP1P23763 118 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 EDNRBP24530 442 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 OR3A3P47888 321 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 OR3A2P47893 321 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 TREML1Q86YW5 311 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF548Q8NEK5 533 aaPredicted RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 SORCS1Q8WY21 1168 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 OR51I1Q9H343 314 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 TREM1Q9NP99 234 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 MKKSQ9NPJ1 570 aaPredicted RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 MLXQ9UH92 298 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 GMEB2Q9UKD1 530 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 GABRDO14764 452 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 H1F0P07305 194 aaKnown RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 DSG2Q14126 1118 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 OXR1Q8N573 874 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PHOSPHO1Q8TCT1 267 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ALPK1Q96QP1 1244 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 RNF38Q9H0F5 515 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 MOCS1Q9NZB8 636 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ADAMTS6Q9UKP5 1117 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ANKRD66B4E2M5 251 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PTGS2P35354 604 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PTGR1Q14914 329 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 SHFQ7M4L6 423 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 CILP2Q8IUL8 1156 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 NCSTNQ92542 709 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 RGMAQ96B86 450 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF350Q9GZX5 532 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 KLHL22Q53GT1 634 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 CCDC116Q8IYX3 515 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 MEAF6Q9HAF1 191 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 M0R036 132 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PLATP00750 562 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC9A3P48764 834 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 IST1P53990 364 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 RPA4Q13156 261 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF678Q5SXM1 525 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 TICAM1Q8IUC6 712 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 CCDC54Q8NEL0 328 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 CMASQ8NFW8 434 aaPredicted RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ERMAPQ96PL5 475 aaPredicted RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 FZD3Q9NPG1 666 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 RPL36Q9Y3U8 105 aaKnown RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 TYRP14679 529 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ETV3P41162 512 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 DHPSP49366 369 aaPredicted RBP13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 FCRLBQ6BAA4 426 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 PDPRQ8NCN5 879 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 COQ8AQ8NI60 647 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 CEP76Q8TAP6 659 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 ANKHQ9HCJ1 492 aa13.2□□□□□ -0.3
TGFBR3-201ENST00000212355 TTC34A8MYJ7 566 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 PLGP00747 810 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 PDYNP01213 254 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CDK6Q00534 326 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 LIPKQ5VXJ0 399 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 GPAT4Q86UL3 456 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 GATAD2BQ8WXI9 593 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 HAVCR1Q96D42 359 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 LRCH3Q96II8 777 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 FBXL12Q9NXK8 326 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 H7BY64 318 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 TOXO94900 526 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 OR12D1P0DN82 309 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 POLR2CP19387 275 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 MSX1P28360 303 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CD40LGP29965 261 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 AP3S2P59780 193 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 MPP2Q14168 576 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 ABHD13Q7L211 337 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 SCAMP4Q969E2 229 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 PRAP1Q96NZ9 151 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC22A4Q9H015 551 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms