RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TEX37Q96LM6 180 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 C1QTNF1Q9BXJ1 281 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 TPT1P8Q9HAU6 139 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 TRNAU1APQ9NX07 287 aaKnown RBP11.66□□□□□ -0.54
CHPF2-201ENST00000035307 UBAP1Q9NZ09 502 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 ZIM2Q9NZV7 527 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 PCDHGA11Q9Y5H2 935 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 N6AMT1Q9Y5N5 214 aa11.66□□□□□ -0.54
CHPF2-201ENST00000035307 CDH1P12830 882 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 NTSP30990 170 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 ARSFP54793 590 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 TAS2R50P59544 299 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 MCCD1P59942 119 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-201ENST00000035307 CDC42P60953 191 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 PTSQ03393 145 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 EMX2Q04743 252 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 C1DQ13901 141 aaKnown RBP11.65□□□□□ -0.54
CHPF2-201ENST00000035307 INAQ16352 499 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 RGS21Q2M5E4 152 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 AMZ1Q400G9 498 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 OGFRL1Q5TC84 451 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-201ENST00000035307 FAM46DQ8NEK8 389 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 UBASH3BQ8TF42 649 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 INPP5KQ9BT40 448 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 PLA2G2FQ9BZM2 168 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 PREBQ9HCU5 417 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 HMG20AQ9NP66 347 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 KLHL28Q9NXS3 571 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 PTTG2Q9NZH5 202 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 IL37Q9NZH6 218 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 DNAJB9Q9UBS3 223 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 EBF1Q9UH73 591 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 A6NHS1 94 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 B4DGG1 531 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 GNB5O14775 395 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 SCELO95171 688 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 UMPSP11172 480 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 AK4P27144 223 aaPredicted RBP11.65□□□□□ -0.54
CHPF2-201ENST00000035307 CCR7P32248 378 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 SOX6P35712 828 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 PTPN5P54829 565 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 DEFA1P59665 94 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 DEFA3P59666 94 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 KLHL12Q53G59 568 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 LIPIQ6XZB0 460 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 ADIPOR2Q86V24 386 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 VRK3Q8IV63 474 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 AADATQ8N5Z0 425 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 WDR36Q8NI36 951 aaKnown RBP11.65□□□□□ -0.54
CHPF2-201ENST00000035307 GATA6Q92908 595 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 ATOH8Q96SQ7 321 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF382Q96SR6 550 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 PLGRKTQ9HBL7 147 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 ASB1Q9Y576 335 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 MGAMO43451 1857 aa11.65□□□□□ -0.54
CHPF2-201ENST00000035307 EFCAB10A6NFE3 127 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 PLOD2O00469 737 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 RGS10O43665 173 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 IGHA2P01877 340 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 C8GP07360 202 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 PRPS2P11908 318 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 FOSL2P15408 326 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 SELPLGQ14242 412 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 HNRNPA1L2Q32P51 320 aaKnown RBP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 ANKRD54Q6NXT1 300 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 LARP4Q71RC2 724 aaKnown RBP eCLIP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 TICAM1Q8IUC6 712 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 FAM160A2Q8N612 972 aaPredicted RBP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 TSTD1Q8NFU3 115 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 RHEBL1Q8TAI7 183 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 FRS2Q8WU20 508 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 ARRDC3Q96B67 414 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 RPF2Q9H7B2 306 aaKnown RBP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 ITM2CQ9NQX7 267 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 STOX2Q9P2F5 926 aaPredicted RBP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 ATXN10Q9UBB4 475 aa11.65□□□□□ -0.55
CHPF2-201ENST00000035307 RUVBL1Q9Y265 456 aaKnown RBP11.65□□□□□ -0.55
CHPF2-201ENST00000035307 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.64□□□□□ -0.55
CHPF2-201ENST00000035307 H0Y8X5 98 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 TSC22D2O75157 780 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 C6orf47O95873 294 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 TSPAN19P0C672 248 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 LAMP2P13473 410 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 HPGDP15428 266 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 GPX3P22352 226 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 NOXRED1Q6NXP6 359 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 KRT73Q86Y46 540 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 TEX26Q8N6G2 289 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 APIPQ96GX9 242 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 SLC35A5Q9BS91 424 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 FNDC11Q9BVV2 318 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 C7orf72A4D263 438 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 FAM25AB3EWG3 89 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 FAM25CB3EWG5 89 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 FAM25GB3EWG6 89 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 H7BY64 318 aa11.64□□□□□ -0.55
CHPF2-201ENST00000035307 STX16O14662 325 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms