RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 HpgdQ8VCC1 269 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ndufaf1Q9CWX2 328 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 RhojQ9ER71 214 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ulk2Q9QY01 1037 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Frem2Q6NVD0 3160 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ccdc120A2AEV7 629 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ccdc163A2AGD7 326 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zfp599E9PWP1 548 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn1r76F8VQ63 324 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rgsl1H3BL40 1073 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm11168J3QN50 228 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Eno2P17183 434 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pou4f1P17208 421 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rab10P61027 200 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 ThraP63058 492 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rgs16P97428 201 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Mmp11Q02853 492 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Scube1Q6NZL8 1018 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 InavaQ7TN12 663 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Znf410Q8BKX7 478 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Bag5Q8CI32 447 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn1r185Q8R299 319 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Mtg1Q8R2R6 326 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cdc42ep1Q91W92 409 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pcdhga10Q91XY9 930 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gins4Q99LZ3 223 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem53Q9D0Z3 276 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Marveld3Q9D956 376 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem225Q9D9S2 230 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 PigqQ9QYT7 581 aa6.67□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fam217bA2AJW5 387 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Trgv2A2J008 116 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cped1B2RX70 1026 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm5478D3Z6R0 159 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn2r97K7N6Z2 861 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn2r93L7N1Z9 857 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Kif1cO35071 1100 aaKnown RBP6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sema6aO35464 1031 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Bcat2O35855 393 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tcn2O88968 430 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Adh1P00329 375 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 GzmgP13366 248 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 PenkP22005 268 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gsta3P30115 221 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Serpina6Q06770 397 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Slc10a7Q5PT53 340 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Grid1Q61627 1009 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sohlh1Q6IUP1 357 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tvp23aQ6NVH0 222 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Atp6v1g3Q8BMC1 118 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 TiparpQ8C1B2 657 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ly6g6eQ8K1T6 166 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Nkx6-1Q99MA9 365 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Haus5Q9D786 619 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ndst3Q9EQH7 873 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ap4s1Q9WVL1 144 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dopey2Q3UHQ6 2295 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zfp236S4R299 1847 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Col4a4Q9QZR9 1682 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm7682A0A0J9YUM1 481 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Itga8A2ARA8 1062 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Epha8O09127 1004 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cbx4O55187 551 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Psmb5O55234 264 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cr2P19070 1025 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vipr2P41588 437 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sephs2P97364 452 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 SnupnQ80W37 358 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ppp1r3bQ8C767 284 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr695Q8VFM3 315 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pcbd2Q9CZL5 136 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Nos1apQ9D3A8 503 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 P2yr13Q9D8I2 337 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ehd3Q9QXY6 535 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 DmdP11531 3678 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 FrylF8VQ05 3007 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm21149A0A0G2JFY7 255 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr1123A2AT85 323 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr1145A2AVC7 325 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr1095A3KPP7 308 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Skint1A7TZE6 364 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Speer4eK7N6S8 255 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm17019K7N6W5 255 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Hk2O08528 917 aaKnown RBP6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sap18O55128 153 aaKnown RBP6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 St3gal5O88829 414 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tacr2P30549 384 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Agtr2P35374 363 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Kcnab1P63143 401 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Mpp1P70290 466 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pde7aP70453 456 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Apoa1Q00623 264 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Aqp1Q02013 269 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Smu1Q3UKJ7 513 aaKnown RBP6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Krt76Q3UV17 594 aaKnown RBP6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dyrk2Q5U4C9 599 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ddx5Q61656 614 aaKnown RBP6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Six3Q62233 333 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fgl1Q71KU9 314 aa6.66□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Scn4bQ7M729 228 aa6.66□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms