RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Rps6kb2Q9Z1M4 485 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Pcm1Q9R0L6 2025 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 2610021A01RikE9Q0Q3 834 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Gtf2h4O70422 463 aaKnown RBP12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Kcnk4O88454 398 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Sh3pxd2aO89032 1124 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Coro1aO89053 461 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 P01807 119 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 C9P06683 548 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 TecP24604 630 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 AhcyP50247 432 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Pim3P58750 326 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Usp39Q3TIX9 564 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Nfatc2Q60591 927 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Zp1Q62005 623 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Carns1Q6ZPS2 827 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Avl9Q80U56 649 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Ppm1nQ8BGL1 404 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Zfp595Q8BIN6 625 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 FicdQ8BIX9 458 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Sec22cQ8BXT9 303 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Zfp57Q8C6P8 421 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 MfrpQ8K480 584 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Il23rQ8K4B4 644 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Akr1c13Q8VC28 323 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Tmem30aQ8VEK0 364 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Isoc1Q91V64 297 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 IqchQ9D2K4 1071 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 RhouQ9EQT3 261 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 VapaQ9WV55 249 aaKnown RBP12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Baz2bA2AUY4 2123 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Alpk2Q91ZB0 2144 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Cilp2D3Z7H8 1162 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 4930579F01RikE9Q3L6 325 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Gnpda1O88958 289 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 GzmcP08882 248 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Nr4a1P12813 601 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Adamts8P57110 905 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Tmc5Q32NZ6 967 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Nr1d2Q60674 576 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Rftn1Q6A0D4 554 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Pcdh20Q8BIZ0 952 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Rbmx2Q8R0F5 326 aaKnown RBP12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Ints14Q8R3P6 515 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Cant1Q8VCF1 403 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 PrkxQ922R0 355 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Vsig1Q9D2J4 407 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 PudpQ9D5U5 234 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Slc39a5Q9D856 535 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Asb3Q9WV72 525 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Padi4Q9Z183 666 aa12.91□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Sppl2cA2A6C4 690 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Pramef20B1ARV6 477 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Klhl4B1AZR0 717 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Tmem240B2RWJ3 173 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Ceacam3E9Q6J4 706 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Scrg1O88745 98 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 St3gal5O88829 414 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 GypaP14220 168 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Hk1P17710 974 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Acvr2aP27038 513 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 NadkP58058 439 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Ebf1Q07802 591 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Osbp2Q5QNQ6 908 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Bod1Q5SQY2 173 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Rbbp7Q60973 425 aaKnown RBP12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 SyncripQ7TMK9 623 aaKnown RBP12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 InavaQ7TN12 663 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Noc4lQ8BHY2 516 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Thoc5Q8BKT7 683 aaKnown RBP12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Trmt2bQ8BQJ6 493 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 GancQ8BVW0 898 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Nck1Q99M51 377 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Rpn2Q9DBG6 631 aaKnown RBP12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Rdh11Q9QYF1 316 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Adam24Q9R160 761 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Ighv11-2A0A075B5R8 117 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Glipr1l3A0A1W2P7V2 236 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Sult2a4L7N245 285 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Slc32a1O35633 525 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Cbx4O55187 551 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 DhfrP00375 187 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 P01675 107 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 P01676 107 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 P01677 107 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 P01678 107 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 H2-K1P01901 369 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Agtr2P35374 363 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 ThrbP37242 461 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 NcanP55066 1268 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Lrpap1P55302 360 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Pla2g5P97391 137 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Fmo5P97872 533 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Plk5Q4FZD7 595 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Ggt1Q60928 568 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Dcaf13Q6PAC3 445 aaKnown RBP12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Olfr664Q7TRP5 306 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Slco4c1Q8BGD4 722 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 Fmo9Q8C116 539 aa12.9□□□□□ -0.34
Prpf38b-201ENSMUST00000029480 D6Wsu163eQ91YN0 552 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms