RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ikzf1Q03267 517 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Esrp1Q3US41 680 aaKnown RBP12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm5416Q6IE28 97 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Txndc15Q6P6J9 344 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1128Q7TR47 311 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dnajc16Q80TN4 772 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Q8BHB7 409 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 SynbQ8BI41 618 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 DrgxQ8BYH0 263 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zfp991Q8R1N3 573 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1276Q8VF40 312 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr345Q8VGK4 311 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r69Q8VIC1 319 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kdelr2Q9CQM2 212 aa12.38□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Adgra2Q91ZV8 1336 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cd300ld2A2A7W0 305 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1121L7MTT1 314 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pld3O35405 488 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 PargO88622 969 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mapkapk2P49138 386 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Snrpd1P62315 119 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tbx5P70326 518 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cpxcr1Q3V0P1 322 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mocs1Q5RKZ7 636 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pum1Q80U78 1189 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Efemp1Q8BPB5 493 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Peli3Q8BXR6 445 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Lcmt2Q8BYR1 686 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dnajc27Q8CFP6 273 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 TympQ99N42 471 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zswim1Q9CWV7 455 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Q9D1K7 174 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Igf2rQ07113 2483 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Myo5aQ99104 1853 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Znf382B2RXC5 579 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Izumo4D3Z690 227 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rhox13F6YCR7 232 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 H2-Q1O19441 368 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mtnd2P03893 345 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Eno2P17183 434 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cfl2P45591 166 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pou2f2Q00196 463 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ifngr2Q63953 332 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Itln1bQ80ZA0 313 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Luzp2Q8BGY3 345 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dmtf1Q8CE22 761 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Scamp1Q8K021 338 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ddx52Q8K301 598 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Asb17Q8VHP9 295 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sdcbp2Q99JZ0 292 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Asf1aQ9CQE6 204 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Arhgap8Q9CXP4 425 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Upk1aQ9D132 257 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Efhc2Q9D485 750 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Shisa8J3QNX5 399 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr319L7MTY4 306 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Chst3O88199 472 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 MbP04247 154 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 CcnjQ3TZI6 379 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 SctrQ5FWI2 447 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc6a4Q60857 630 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tssk1bQ61241 365 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Lats2Q7TSJ6 1042 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hmbox1Q8BJA3 419 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kcnk10Q8BUW1 535 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Mterf3Q8R3J4 412 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vps29Q9QZ88 182 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Elf4Q9Z2U4 655 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Crisp4E9PVG4 293 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Ces2hF6Z9B9 558 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Psmc3ipO35047 217 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sept4P28661 478 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rpl10lP86048 214 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 MocosQ14CH1 862 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Nell1Q2VWQ2 810 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Naf1Q3UMQ8 489 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tmem253Q3UNB8 204 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Nxf3Q4ZGD9 553 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Zswim9Q6DI92 447 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Snx6Q6P8X1 406 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Catsper4Q8BVN3 442 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Serpina11Q8CIE0 424 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Sf3b4Q8QZY9 424 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r198Q8R263 300 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Vmn1r33Q8R2E0 305 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Rbms2Q8VC70 383 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Aco2Q99KI0 780 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 2410137M14RikQ9CWF0 162 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Pinx1Q9CZX5 332 aaKnown RBP12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tnfsf13Q9D777 241 aa12.37□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Btnl4A2CG29 586 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 B020004C17RikJ3QP07 232 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 StimateQ3UF25 288 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Spata13Q5DU57 656 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 PmlQ60953 885 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Tlx2Q61663 284 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 BC080695Q66JY9 481 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Dpp10Q6NXK7 797 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Hfe2Q7TQ32 420 aa12.36□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kxd1Q80XH1 177 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms