RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 MGAT4AQ9UM21 535 aa-0.1□□□□□ -2.43
LMBR1-222ENST00000638959 CPQQ9Y646 472 aa-0.1□□□□□ -2.43
LMBR1-222ENST00000638959 RP1L1Q8IWN7 2480 aaPredicted RBP-0.1□□□□□ -2.43
LMBR1-222ENST00000638959 SORL1Q92673 2214 aa-0.1□□□□□ -2.43
LMBR1-222ENST00000638959 PCDH11YQ9BZA8 1340 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 GTF3C1Q12789 2109 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 GLTPD2A6NH11 291 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 FOXI3A8MTJ6 420 aaPredicted RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 OGG1O15527 345 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 C6orf47O95873 294 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 DCNP07585 359 aaKnown RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 CELP19835 753 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 MAGP20916 626 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 PSMC2P35998 433 aaKnown RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 NUDT1P36639 197 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 MAGEA9P43362 315 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 PAPOLAP51003 745 aaKnown RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 TFAP4Q01664 338 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 SLC12A1Q13621 1099 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 FRG1Q14331 258 aaKnown RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 HERPUD1Q15011 391 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 ABRAXAS2Q15018 415 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 KNOP1Q1ED39 458 aaKnown RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 KRTAP13-2Q52LG2 175 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 LDB1Q86U70 411 aaPredicted RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 MOGAT3Q86VF5 341 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 SLC22A15Q8IZD6 547 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 SLC22A18ASQ8N1D0 253 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 BANPQ8N9N5 519 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 CCDC71LQ8N9Z2 235 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 THAP8Q8NA92 274 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 ZCCHC10Q8TBK6 192 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF596Q8TC21 504 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 HDAC2Q92769 488 aaKnown RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 FAM167BQ9BTA0 163 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 UBQLN3Q9H347 655 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 TRPV4Q9HBA0 871 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 PRDM4Q9UKN5 801 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 ELF5Q9UKW6 265 aaPredicted RBP-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 TRIM17Q9Y577 477 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 RFNGQ9Y644 331 aa-0.11□□□□□ -2.43
LMBR1-222ENST00000638959 BRWD3Q6RI45 1802 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 IGHV3-35A0A0C4DH35 117 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 TRBV5-5A0A0J9YX44 114 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 A0A1B0GUA9 196 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 A0A1W2PRG0 241 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 ZSCAN5BA6NJL1 495 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF878C9JN71 531 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 SSX4O60224 188 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 IGHG1P01857 330 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 S100BP04271 92 aaPredicted RBP-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 CD22P20273 847 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 ACADLP28330 430 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 HMGCLP35914 325 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 SRSF9Q13242 221 aaKnown RBP eCLIP-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 SRSF5Q13243 272 aaKnown RBP-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 EIF4A2Q14240 407 aaKnown RBP-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 MELKQ14680 651 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 PRICKLE4Q2TBC4 344 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 CCDC14Q49A88 953 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 CCDC38Q502W7 563 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 ATP1A1-AS1Q5TC04 95 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 JADE1Q6IE81 842 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 RFWD3Q6PCD5 774 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 SLC24A5Q71RS6 500 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 NUDT13Q86X67 352 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 ZNF677Q86XU0 584 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 SPICE1Q8N0Z3 855 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 NME8Q8N427 588 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 TCEANCQ8N8B7 351 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 FAM20AQ96MK3 541 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 FOPNLQ96NB1 174 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 WDR12Q9GZL7 423 aaKnown RBP-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 CUEDC2Q9H467 287 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 DNAJC18Q9H819 358 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 WDR41Q9HAD4 459 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 PPP1R14DQ9NXH3 145 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 MARCOQ9UEW3 520 aaPredicted RBP-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 PCDHGA5Q9Y5G8 931 aa-0.12□□□□□ -2.43
LMBR1-222ENST00000638959 IGSF1Q8N6C5 1336 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 CFAP65Q6ZU64 1925 aaKnown RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 SPATA31D1Q6ZQQ2 1576 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 TRBV6-6A0A0A6YYG2 114 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 FOXE1O00358 373 aaPredicted RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 SAP18O00422 153 aaKnown RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 E2F3O00716 465 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 TSPAN4O14817 238 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 INPP4BO15327 924 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 GPAA1O43292 621 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 TNFSF12O43508 249 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 NDUFS3O75489 264 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 DEDDO75618 318 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 RBBP9O75884 186 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 NBPF7P0C2Y1 421 aaPredicted RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 ZCCHC18P0CG32 403 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 C4BPBP20851 252 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 FCGR2BP31994 310 aaPredicted RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 FCGR2CP31995 323 aa-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 ARL1P40616 181 aaPredicted RBP-0.13□□□□□ -2.43
LMBR1-222ENST00000638959 CAV2P51636 162 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms