RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 ANXA4P09525 319 aaPredicted RBP10.34□□□□□ -0.75
PSPC1-207ENST00000635251 BMP4P12644 408 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 ACVR2AP27037 513 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 NAE1Q13564 534 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 HIST2H2ACQ16777 129 aaPredicted RBP10.34□□□□□ -0.75
PSPC1-207ENST00000635251 ZNF648Q5T619 568 aaPredicted RBP10.34□□□□□ -0.75
PSPC1-207ENST00000635251 TCEAL8Q8IYN2 117 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 ENTHD1Q8IYW4 607 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
PSPC1-207ENST00000635251 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 WDR20Q8TBZ3 569 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 SPPL2AQ8TCT8 520 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 RPL3LQ92901 407 aaKnown RBP10.34□□□□□ -0.75
PSPC1-207ENST00000635251 CLP1Q92989 425 aaKnown RBP10.34□□□□□ -0.75
PSPC1-207ENST00000635251 SCAMP4Q969E2 229 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 MAL2Q969L2 176 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 DACH2Q96NX9 599 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 EPYCQ99645 322 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 SH3BP4Q9P0V3 963 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 CORO2BQ9UQ03 480 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 ERVK-11Q9UQG0 969 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 BTBD3Q9Y2F9 522 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 TESMINQ9Y4I5 508 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 ANAPC1Q9H1A4 1944 aa10.34□□□□□ -0.75
PSPC1-207ENST00000635251 GNG14A0A1W2PPG7 69 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 OR2A25A4D2G3 310 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GABRR3A8MPY1 467 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 EFCAB9A8MZ26 197 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GRM6O15303 877 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PCDHGA12O60330 932 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 VIPP01282 170 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ALOX5P09917 674 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GJA1P17302 382 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PPIBP23284 216 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 TGFBR1P36897 503 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ZNF33BQ06732 778 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 DNASE1L3Q13609 305 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 KCNC3Q14003 757 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 RGNQ15493 299 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ANXA8L1Q5VT79 327 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 FAHD1Q6P587 224 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 CCDC71Q8IV32 467 aaPredicted RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ZNF513Q8N8E2 541 aaPredicted RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GPR156Q8NFN8 814 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 OR4A15Q8NGL6 344 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PHF10Q8WUB8 498 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ZNF558Q96NG5 402 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PITX2Q99697 317 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 COPS4Q9BT78 406 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ITPAQ9BY32 194 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 FAM83DQ9H4H8 585 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 FBXO8Q9NRD0 319 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ZNF451Q9Y4E5 1061 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PCDHGB3Q9Y5G1 929 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PIKFYVEQ9Y2I7 2098 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ARHGEF33A8MVX0 844 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 TNFRSF11BO00300 401 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 WBP4O75554 376 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 OPN1SWP03999 348 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GSTM1P09488 218 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 HLA-FP30511 346 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 HNF4AP41235 474 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 CRATP43155 626 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ASMTP46597 345 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 EIF2B2P49770 351 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 CASP9P55211 416 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 POLR2LP62875 67 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 CSNK2BP67870 215 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 KCNJ10P78508 379 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 IFITM3Q01628 133 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 FPGSQ05932 587 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 MAPK11Q15759 364 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 SYT16Q17RD7 645 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GRHL2Q6ISB3 625 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 AGTRAPQ6RW13 159 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 Q6ZPB1 254 aaPredicted RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 Q6ZVU0 165 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 NEK10Q6ZWH5 1172 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GAREM2Q75VX8 874 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 GPR155Q7Z3F1 870 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 MFSD4AQ8N468 514 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 CHST14Q8NCH0 376 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 APH1BQ8WW43 257 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 ATL1Q8WXF7 558 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 DNASE1L2Q92874 299 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 TMEM159Q96B96 161 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 DOHHQ9BU89 302 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 HERC2P3Q9BVR0 1158 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 SPATA9Q9BWV2 254 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 CPEB1Q9BZB8 566 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 SMG9Q9H0W8 520 aaKnown RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 SPATA6Q9NWH7 488 aaPredicted RBP10.33□□□□□ -0.76
PSPC1-207ENST00000635251 RAPGEFL1Q9UHV5 662 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 SLCO3A1Q9UIG8 710 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 RNF6Q9Y252 685 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 HS3ST2Q9Y278 367 aa10.33□□□□□ -0.76
PSPC1-207ENST00000635251 PCDHGA6Q9Y5G7 932 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms