RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 RADILQ96JH8 1075 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 DMRTB1Q96MA1 342 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 NPLQ9BXD5 320 aaPredicted RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 PLA2G2FQ9BZM2 168 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SUV39H2Q9H5I1 410 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SLC2A4RGQ9NR83 387 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SMOXQ9NWM0 555 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 CLDND1Q9NY35 253 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ALBP02768 609 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CD63P08962 238 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CLCN5P51795 746 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 TMBIM6P55061 237 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 PUDPQ08623 228 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 KCNAB2Q13303 367 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ZNF273Q14593 569 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 RAB39AQ14964 217 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 HNRNPA1L2Q32P51 320 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 CASC4Q6P4E1 433 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 C12orf40Q86WS4 652 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 DSELQ8IZU8 1212 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CHFRQ96EP1 664 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 NAA50Q9GZZ1 169 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 OLAHQ9NV23 265 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ING3Q9NXR8 418 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ARMCX1Q9P291 453 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 TLK1Q9UKI8 766 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 PSME2Q9UL46 239 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 TRBV5-4A0A0C4DH59 114 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 HMX2A2RU54 273 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 MBTPS2O43462 519 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 EIF1BO60739 113 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 RFPL1O75677 317 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 WISP3O95389 354 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 PRNPP04156 253 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 DHRS4L1P0CG22 281 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 DDOSTP39656 456 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ETV5P41161 510 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 EIF1P41567 113 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 DLX2Q07687 328 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 EFR3AQ14156 821 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CAPRIN1Q14444 709 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 ZMAT1Q5H9K5 638 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 GDPD4Q6W3E5 623 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 LINC00299Q6ZSB3 139 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 TPRG1Q6ZUI0 275 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CYP4Z2PQ8N1L4 340 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 SNX31Q8N9S9 440 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 OR2T3Q8NH03 318 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 MFSD3Q96ES6 412 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 RACGAP1Q9H0H5 632 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ENAMQ9NRM1 1142 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 DNAJC11Q9NVH1 559 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 IL17CQ9P0M4 197 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 RAB23Q9ULC3 237 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 TRIM38O00635 465 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 UGT2B4P06133 528 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CYP2A6P11509 494 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 NELFEP18615 380 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 RPS3P23396 243 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS11-206ENST00000614944 OXTRP30559 389 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CRHR1P34998 444 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CTSOP43234 321 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 CHRNA4P43681 627 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 RIDAP52758 137 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 ABCE1P61221 599 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 ST8SIA6P61647 398 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ZBTB37Q5TC79 503 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 PARM1Q6UWI2 310 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 CERS6Q6ZMG9 384 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 USP45Q70EL2 814 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 NOXA1Q86UR1 476 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ZC3HC1Q86WB0 502 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 ATG16L2Q8NAA4 619 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 SGTBQ96EQ0 304 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 PHF7Q9BWX1 381 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 GTPBP2Q9BX10 602 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 IL36AQ9UHA7 158 aa8.53□□□□□ -1.04
VPS11-206ENST00000614944 EIF2B4Q9UI10 523 aaKnown RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 MTF2Q9Y483 593 aaPredicted RBP8.53□□□□□ -1.04
VPS11-206ENST00000614944 PLXNB3Q9ULL4 1909 aa8.52□□□□□ -1.04
VPS11-206ENST00000614944 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
VPS11-206ENST00000614944 SGCEO43556 437 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 TNFRSF21O75509 655 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 APOL3O95236 402 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 APODP05090 189 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.05
VPS11-206ENST00000614944 ITGB7P26010 798 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 GRIA3P42263 894 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 RAB13P51153 203 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 EPHB1P54762 984 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 POU4F1Q01851 419 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 OVGP1Q12889 678 aa8.52□□□□□ -1.05
VPS11-206ENST00000614944 OLIG2Q13516 323 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms