RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PPARGP37231 505 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 EIF2S3P41091 472 aaKnown RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 SSR1P43307 286 aaKnown RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 MAGEA1P43355 309 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 CSNK1EP49674 416 aaKnown RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 TERF1P54274 439 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ADPRHP54922 357 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 TAS2R40P59535 323 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 TPI1P60174 286 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 MESDQ14696 234 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 PPP6R3Q5H9R7 873 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ERMARDQ5T6L9 678 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ABHD17BQ5VST6 288 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ANKRD16Q6P6B7 361 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 LINGO4Q6UY18 593 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 TAGAPQ8N103 731 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 NIPA2Q8N8Q9 360 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ZNF557Q8N988 423 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 INTS12Q96CB8 462 aaKnown RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ALG14Q96F25 216 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ZNF845Q96IR2 970 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 RADILQ96JH8 1075 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 PSMB7Q99436 277 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 BAG1Q99933 345 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 FEM1AQ9BSK4 669 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 DESI2Q9BSY9 194 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 GOLPH3Q9H4A6 298 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ZCCHC4Q9H5U6 513 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 TM9SF3Q9HD45 589 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 TMEM51Q9NW97 253 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 UVRAGQ9P2Y5 699 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 UPB1Q9UBR1 384 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 ERVW-1Q9UQF0 538 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 REXO2Q9Y3B8 237 aaKnown RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 MFHAS1Q9Y4C4 1052 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 HYOU1Q9Y4L1 999 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 PCDHGA1Q9Y5H4 931 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 OR51B4Q9Y5P0 310 aa7.54□□□□□ -1.2
ATG4D-210ENST00000588972 EPN1Q9Y6I3 576 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-210ENST00000588972 C17orf113A0A1B0GUU1 675 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 FAM237BA0A1B0GVD1 139 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 EIF3CLB5ME19 914 aaKnown RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 MCIDASD6RGH6 385 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 J3QKU1 62 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 QSOX1O00391 747 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 TLX3O43711 291 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 PROSCO94903 275 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 LCA5LO95447 670 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ADH4P08319 380 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 CD48P09326 243 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 C1SP09871 688 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 RFPL3SP0C7P2 107 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 CDK4P11802 303 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 NDUFB7P17568 137 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 EPHB2P29323 1055 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 PCK1P35558 622 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 CYLC1P35663 651 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ACVRL1P37023 503 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ZNF84P51523 738 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 AIF1P55008 147 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 EEFSECP57772 596 aaKnown RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 OLR1P78380 273 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 SEMG2Q02383 582 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ABHD18Q0P651 414 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 PIGHQ14442 188 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 SEMA3AQ14563 771 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 MFSD13AQ14CX5 517 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 SPA17Q15506 151 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 KAZNQ674X7 775 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 LEKR1Q6ZMV7 388 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 MDGA2Q7Z553 956 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 SETD3Q86TU7 594 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 FAM110DQ8TAY7 271 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 EXTL1Q92935 676 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ARHGEF2Q92974 986 aaKnown RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 CELF6Q96J87 481 aaKnown RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 FYTTD1Q96QD9 318 aaKnown RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 HEMGNQ9BXL5 484 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 TMEM245Q9H330 911 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 C6orf106Q9H6K1 298 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 TMEM248Q9NWD8 314 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 GAR1Q9NY12 217 aaKnown RBP7.53□□□□□ -1.2
ATG4D-210ENST00000588972 PLA2G4CQ9UP65 541 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 SLCO1B1Q9Y6L6 691 aa7.53□□□□□ -1.2
ATG4D-210ENST00000588972 ILVBLA1L0T0 632 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 PABPN1LA6NDY0 278 aaKnown RBP7.52□□□□□ -1.21
ATG4D-210ENST00000588972 K7ERQ8 282 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 PAX4O43316 350 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 SMAD6O43541 496 aaKnown RBP7.52□□□□□ -1.21
ATG4D-210ENST00000588972 DFNA5O60443 496 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 MTA2O94776 668 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 SEMA4FO95754 770 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 SRPRAP08240 638 aaKnown RBP7.52□□□□□ -1.21
ATG4D-210ENST00000588972 EBLN1P0CF75 366 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 SRCP12931 536 aa7.52□□□□□ -1.21
ATG4D-210ENST00000588972 CDH2P19022 906 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms