RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 WDR92Q96MX6 357 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 EFHD1Q9BUP0 239 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 NANOGQ9H9S0 305 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 BATF3Q9NR55 127 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 ACTR3BQ9P1U1 418 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 FRYLO94915 3013 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 ZFC3H1O60293 1989 aaKnown RBP17.84■□□□□ 0.45
RETREG3-205ENST00000586870 TRPM6Q9BX84 2022 aa17.84■□□□□ 0.45
RETREG3-205ENST00000586870 KRT87PA6NCN2 255 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 DNAJA2O60884 412 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 SDC3O75056 442 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 SLC16A8O95907 504 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 CAPNS1P04632 268 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 HOXC4P09017 264 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-205ENST00000586870 MYCLP1P12525 358 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-205ENST00000586870 JUNDP17535 347 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 TEAD1P28347 426 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 CASP2P42575 452 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 GSK3BP49841 420 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 NEK2P51955 445 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 CLDN8P56748 225 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 KIAA1024LP59773 190 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 BNIP3Q12983 259 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 RPA4Q13156 261 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 PTGR1Q14914 329 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 GRHL2Q6ISB3 625 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 IRGCQ6NXR0 463 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 SUSD1Q6UWL2 747 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 XKR5Q6UX68 686 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 DLEU7Q6UYE1 221 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 PTRH1Q86Y79 214 aaKnown RBP17.83■□□□□ 0.45
RETREG3-205ENST00000586870 GATAD2AQ86YP4 633 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 SLC13A3Q8WWT9 602 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 MED8Q96G25 268 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 CLMPQ9H6B4 373 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 COPS7BQ9H9Q2 264 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-205ENST00000586870 PCDHGB2Q9Y5G2 931 aa17.83■□□□□ 0.45
RETREG3-205ENST00000586870 DNMT3AQ9Y6K1 912 aaPredicted RBP17.83■□□□□ 0.45
RETREG3-205ENST00000586870 RALGAPA1Q6GYQ0 2036 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 H0YIV9 168 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 PCDHGA12O60330 932 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 CSF2P04141 144 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 HSD3B1P14060 373 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 CTSEP14091 401 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 HSD3B2P26439 372 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 ID4P47928 161 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 DGKQP52824 942 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 CLNS1AP54105 237 aaKnown RBP17.83■□□□□ 0.44
RETREG3-205ENST00000586870 PNLIPRP1P54315 467 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 CDK3Q00526 305 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 LIPEQ05469 1076 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 DOC2AQ14183 400 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 E2F2Q14209 437 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 TPRG1LQ5T0D9 272 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 UNC5DQ6UXZ4 953 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 OR9A1PQ8NGU1 263 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 DNAJB8Q8NHS0 232 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 RHBDD1Q8TEB9 315 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 TSACCQ96A04 125 aaPredicted RBP17.83■□□□□ 0.44
RETREG3-205ENST00000586870 METTL2AQ96IZ6 378 aaKnown RBP17.83■□□□□ 0.44
RETREG3-205ENST00000586870 CGREF1Q99674 301 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 PKP2Q99959 881 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 LGR4Q9BXB1 951 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 TEX101Q9BY14 249 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 ALG2Q9H553 416 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 GPR27Q9NS67 375 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 DTNAQ9Y4J8 743 aa17.83■□□□□ 0.44
RETREG3-205ENST00000586870 ZNF292O60281 2723 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 E7EQ34 232 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 FLRT2O43155 660 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 KCNH1O95259 989 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 RASGRP1O95267 797 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 TNFP01375 233 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 ATP6V1B2P21281 511 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 ACADLP28330 430 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 EPHA8P29322 1005 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 SRP54P61011 504 aaKnown RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 EIF2B5Q13144 721 aaKnown RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 PUM1Q14671 1186 aaKnown RBP eCLIP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 SFT2D3Q587I9 215 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 RABL3Q5HYI8 236 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 CAPN13Q6MZZ7 669 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 DOK6Q6PKX4 331 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 CRTC3Q6UUV7 619 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 CYP2R1Q6VVX0 501 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 C11orf96Q7Z7L8 435 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 PHACTR4Q8IZ21 702 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 LILRA2Q8N149 483 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 TMEM102Q8N9M5 508 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 WDR20Q8TBZ3 569 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 FCRL1Q96LA6 429 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 OR4K3Q96R72 315 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 KCTD14Q9BQ13 255 aaPredicted RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 SLAMF8Q9P0V8 285 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 GMPR2Q9P2T1 348 aaKnown RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 SPASTQ9UBP0 616 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 APOBEC3BQ9UH17 382 aaKnown RBP17.82■□□□□ 0.44
RETREG3-205ENST00000586870 KCNE2Q9Y6J6 123 aa17.82■□□□□ 0.44
RETREG3-205ENST00000586870 GVINP1Q7Z2Y8 2422 aa17.81■□□□□ 0.44
RETREG3-205ENST00000586870 SH3BP5O60239 455 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms