RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 SH3D21A4FU49 640 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 NPEPPSL1A6NEC2 478 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 SMLR1H3BR10 107 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 BTN3A1O00481 513 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 FGF10O15520 208 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 TSC22D2O75157 780 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 RAF1P04049 648 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 TSPAN19P0C672 248 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 STC1P52823 247 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 RPL38P63173 70 aaKnown RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 SMARCB1Q12824 385 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 ABRAXAS2Q15018 415 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 KIAA1324Q6UXG2 1013 aaKnown RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 CATSPERGQ6ZRH7 1159 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 EIF3MQ7L2H7 374 aaKnown RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 C1orf52Q8N6N3 182 aaKnown RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 CLDN22Q8N7P3 220 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 OR8K5Q8NH50 307 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 SLC25A46Q96AG3 418 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 DIRAS2Q96HU8 199 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 SENP8Q96LD8 212 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 CXCL16Q9H2A7 254 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 HHATLQ9HCP6 504 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 EXOSC4Q9NPD3 245 aaKnown RBP12.7□□□□□ -0.38
DNMT1-207ENST00000586588 ING4Q9UNL4 249 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 MED16Q9Y2X0 877 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 PCDHGB3Q9Y5G1 929 aa12.7□□□□□ -0.38
DNMT1-207ENST00000586588 CIB4A0PJX0 185 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 C22orf31O95567 290 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 FHP07954 510 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 ARSBP15848 533 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 EDNRBP24530 442 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PSMA1P25786 263 aaKnown RBP12.69□□□□□ -0.38
DNMT1-207ENST00000586588 HOXC13P31276 330 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 KLHL12Q53G59 568 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PYDC2Q56P42 97 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 GPR139Q6DWJ6 353 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 RNF165Q6ZSG1 346 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 SAMD11Q96NU1 681 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 SERHLQ9NQF3 203 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 MS4A12Q9NXJ0 267 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PTTG3PQ9NZH4 202 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 SH3BP4Q9P0V3 963 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 CFAP20Q9Y6A4 193 aaKnown RBP12.69□□□□□ -0.38
DNMT1-207ENST00000586588 CLDN5O00501 218 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PIRO00625 290 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 RGS14O43566 566 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 ATG13O75143 517 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 RRASP10301 218 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 CRYBB2P43320 205 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 CBX5P45973 191 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 IQCCQ4KMZ1 466 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 CBLL1Q75N03 491 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 C16orf62Q7Z3J2 963 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 GPSM1Q86YR5 675 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 LURAP1LQ8IV03 231 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 LINC00518Q8N0U6 118 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 UQCC2Q9BRT2 126 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PIGUQ9H490 435 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 CATSPERZQ9NTU4 200 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PHF11Q9UIL8 331 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 ASB1Q9Y576 335 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 KCTD3Q9Y597 815 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PCDHGB7Q9Y5F8 929 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 PCDHGA2Q9Y5H1 932 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 FKBP7Q9Y680 259 aa12.69□□□□□ -0.38
DNMT1-207ENST00000586588 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 A8MUA0 341 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 WASH4PA8MWX3 477 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 H3BM21 787 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 IL1AP01583 271 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 CYP17A1P05093 508 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 PTPN6P29350 595 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 CCR1P32246 355 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 KDELR2P33947 212 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 IDH2P48735 452 aaKnown RBP12.68□□□□□ -0.38
DNMT1-207ENST00000586588 HK3P52790 923 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 WSCD2Q2TBF2 565 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 DDI2Q5TDH0 399 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 AFMIDQ63HM1 303 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 C19orf18Q8NEA5 215 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 VANGL1Q8TAA9 524 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-207ENST00000586588 ESAMQ96AP7 390 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 ULK4Q96C45 1275 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 HBEGFQ99075 208 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 RANBP3Q9H6Z4 567 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-207ENST00000586588 SYNDIG1Q9H7V2 258 aa12.68□□□□□ -0.38
DNMT1-207ENST00000586588 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms