RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 KCNJ13O60928 360 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SEMA3DO95025 777 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 FKBP9O95302 570 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SNAP29O95721 258 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SEMG1P04279 462 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ITGAMP11215 1152 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ERGP11308 486 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 KELP23276 732 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 FSHRP23945 695 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 TACR1P25103 407 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 PTX3P26022 381 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 ACADLP28330 430 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 BDKRB1P46663 353 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 NEK2P51955 445 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ARHGDIAP52565 204 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ZNF763Q0D2J5 394 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 GPM6BQ13491 265 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 TUBA3CQ13748 450 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 PDE7AQ13946 482 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ZNF234Q14588 700 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 CPTPQ5TA50 214 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 NAIF1Q69YI7 327 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 RAET1GQ6H3X3 334 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 OR4F3Q6IEY1 312 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SHQ1Q6PI26 577 aaKnown RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 ZNF773Q6PK81 442 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 DOK6Q6PKX4 331 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 CBLL1Q75N03 491 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 EIF3MQ7L2H7 374 aaKnown RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 THAP5Q7Z6K1 395 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 STK32CQ86UX6 486 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 C12orf40Q86WS4 652 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 LRRC56Q8IYG6 542 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 ZZZ3Q8IYH5 903 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 C8orf59Q8N0T1 100 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 KRT78Q8N1N4 520 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SETD9Q8NE22 299 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 CLHC1Q8NHS4 586 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 FBXO30Q8TB52 745 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 CXorf40AQ8TE69 158 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ZNF480Q8WV37 535 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SLC5A11Q8WWX8 675 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ING5Q8WYH8 240 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ZNF764Q96H86 408 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 HIC2Q96JB3 615 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 LRRC3BQ96PB8 259 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 OR4K3Q96R72 315 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 ASPSCR1Q9BZE9 553 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 PIF1Q9H611 641 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 NT5DC2Q9H857 520 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 PELI2Q9HAT8 420 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 MYNNQ9NPC7 610 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 IL1RAPQ9NPH3 570 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 CCDC177Q9NQR7 707 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 AHSPQ9NZD4 102 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 THAP10Q9P2Z0 257 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 VPS4AQ9UN37 437 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 CKAP5Q14008 2032 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 TMEM202A6NGA9 273 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 PCDH7O60245 1069 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 UGT2B11O75310 529 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 OR6B1O95007 311 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 KCNK5O95279 499 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 CPNE6O95741 557 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 SERPINA1P01009 418 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ANXA4P09525 319 aaPredicted RBP9.35□□□□□ -0.91
RTF1-206ENST00000560447 NPPBP16860 134 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ENGP17813 658 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 IDSP22304 550 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 CXCR2P25025 360 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 KDELR2P33947 212 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 RYKP34925 604 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 PCGF2P35227 344 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 DCTP40126 519 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 PREPP48147 710 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 NUP107P57740 925 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 TBPL1P62380 186 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 RAE1P78406 368 aaKnown RBP9.35□□□□□ -0.91
RTF1-206ENST00000560447 CTBSQ01459 385 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 GRSF1Q12849 480 aaKnown RBP eCLIP9.35□□□□□ -0.91
RTF1-206ENST00000560447 FADDQ13158 208 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ENPP2Q13822 863 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 RBBP5Q15291 538 aaKnown RBP9.35□□□□□ -0.91
RTF1-206ENST00000560447 AAK1Q2M2I8 961 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 GTDC1Q4AE62 458 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 PYCR3Q53H96 274 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 TCEAL5Q5H9L2 206 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 FAM78AQ5JUQ0 283 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 THEMIS2Q5TEJ8 643 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 TMEM214Q6NUQ4 689 aaKnown RBP9.35□□□□□ -0.91
RTF1-206ENST00000560447 NXPE4Q6UWF7 544 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ENPP6Q6UWR7 440 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 PDZD3Q86UT5 571 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 TRAPPC5Q8IUR0 188 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ZDHHC21Q8IVQ6 265 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 DCUN1D3Q8IWE4 304 aa9.35□□□□□ -0.91
RTF1-206ENST00000560447 ZC3H7AQ8IWR0 971 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms