RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 ERGP11308 486 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 PAMP19021 973 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 GCAP28676 217 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 BDKRB1P46663 353 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 ADARP55265 1226 aaKnown RBP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 CRYMQ14894 314 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 EFTUD2Q15029 972 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 TYSND1Q2T9J0 566 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 MUM1Q2TAK8 710 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 GKAP1Q5VSY0 366 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 MRNIPQ6NTE8 343 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 KIRREL2Q6UWL6 708 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 LDB1Q86U70 411 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 LURAP1LQ8IV03 231 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 CYP4X1Q8N118 509 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 OTUD6BQ8N6M0 293 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 OR2L3Q8NG85 312 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 MGARPQ8TDB4 240 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 MVB12AQ96EY5 273 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 CRB3Q9BUF7 120 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 CHRAC1Q9NRG0 131 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 CTSFQ9UBX1 484 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 ERRFI1Q9UJM3 462 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-214ENST00000560402 MDC1Q14676 2089 aaKnown RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 FAM237BA0A1B0GVD1 139 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 A1L4Q6 167 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 OR2A25A4D2G3 310 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 PCDH17O14917 1159 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 CTSVO60911 334 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 VPS26AO75436 327 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 USP1O94782 785 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 HPP00738 406 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ESR1P03372 595 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ERVK-10P10266 1014 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 KRT4P19013 534 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 OGNP20774 298 aaKnown RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 FDXRP22570 491 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 CMPK1P30085 196 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 GLRBP48167 497 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 EMP3P54852 163 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 FOXL2P58012 376 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 VSX2P58304 361 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 OCA2Q04671 838 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ILF2Q12905 390 aaKnown RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 GBX1Q14549 363 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 WASHC2DQ5SRD0 308 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 SDCCAG8Q86SQ7 713 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF473Q8WTR7 871 aaKnown RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF669Q96BR6 464 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 MAGEB18Q96M61 343 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 CCT8L2Q96SF2 557 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 TCF12Q99081 682 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 MIPEPQ99797 713 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ZFYVE21Q9BQ24 234 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 PLCD4Q9BRC7 762 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 KIFC1Q9BW19 673 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 SOX17Q9H6I2 414 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF304Q9HCX3 659 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 C14orf105Q9NVL8 296 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 SYBUQ9NX95 663 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF282Q9UDV7 671 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-214ENST00000560402 CDC14AQ9UNH5 594 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
SMAD3-214ENST00000560402 CPAMD8Q8IZJ3 1885 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 CNTRLQ7Z7A1 2325 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 IGLV3-12A0A075B6K2 115 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 A0A1W2PPV9 198 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 HYKKA2RU49 373 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF839A8K0R7 811 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 COPEO14579 308 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 CCNDBP1O95273 360 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ACPPP15309 386 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 PSMB5P28074 263 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 NMBRP28336 390 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 HSD17B2P37059 387 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 PER3P56645 1201 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF169Q14929 603 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ARHGAP19Q14CB8 494 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 TLR1Q15399 786 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 CTSL3PQ5NE16 218 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 HIST2H2BCQ6DN03 193 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 KIAA0930Q6ICG6 404 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ISLR2Q6UXK2 745 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 TRIM42Q8IWZ5 723 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 OR11G2Q8NGC1 345 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 OR2A1Q8NGT9 310 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ACMSDQ8TDX5 336 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-214ENST00000560402 CKAP2Q8WWK9 683 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 LPGAT1Q92604 370 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 MIEF2Q96C03 454 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 CERS2Q96G23 380 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 APOPT1Q96IL0 206 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms