RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ABCC13Q9NSE7 274 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ATAD3AQ9NVI7 634 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 NMRK1Q9NWW6 199 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 MIOSQ9NXC5 875 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 EHD3Q9NZN3 535 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 DNMT3BQ9UBC3 853 aaKnown RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 CDH22Q9UJ99 828 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 LEF1Q9UJU2 399 aaPredicted RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 FZD10Q9ULW2 581 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CHKBQ9Y259 395 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 KCNK7Q9Y2U2 307 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 NME7Q9Y5B8 376 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PCDHB7Q9Y5E2 793 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 FRMPD3Q5JV73 1810 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PCSK5Q92824 1860 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ARPC4-TTLL3A0A0A6YYG9 625 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 MYBPHLA2RUH7 354 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 C5orf60A6NFR6 353 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 SLC9B1P1A6NJY1 282 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 E7ESA3 106 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 M0QYT0 321 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 CLDN5O00501 218 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ADAMDEC1O15204 470 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PPM1DO15297 605 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ZSCAN9O15535 394 aaPredicted RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 KCNN4O15554 427 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PSMD3O43242 534 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ATP2C2O75185 946 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TADA2AO75478 443 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 GCATO75600 419 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 OAZ2O95190 189 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 SLC2A3P11169 496 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ERCC2P18074 760 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 SP100P23497 879 aaPredicted RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 ACAT1P24752 427 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 GDI1P31150 447 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 RPL22P35268 128 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 MDH1P40925 334 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 MAGEA6P43360 314 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 MAGEA11P43364 429 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 OR1G1P47890 313 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 GBX2P52951 348 aaPredicted RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 STX1BP61266 288 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 GNGT1P63211 74 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 BASP1P80723 227 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 ZNF33AQ06730 810 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 CSHL1Q14406 222 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ZNF273Q14593 569 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PAFAH1B3Q15102 231 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 KLHL38Q2WGJ6 581 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TBRG1Q3YBR2 411 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PPP6R3Q5H9R7 873 aaPredicted RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 KCTD16Q68DU8 428 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ETFRF1Q6IPR1 90 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TRNP1Q6NT89 227 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ZYG11AQ6WRX3 759 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 CYP4V2Q6ZWL3 525 aaPredicted RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 BNIPLQ7Z465 357 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 KCTD20Q7Z5Y7 419 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TADA2BQ86TJ2 420 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TICAM1Q8IUC6 712 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 LRRC49Q8IUZ0 686 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 MINDY1Q8N5J2 469 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PTGR2Q8N8N7 351 aaPredicted RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 MCUQ8NE86 351 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TNIP2Q8NFZ5 429 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 SPPL2BQ8TCT7 592 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PYROXD1Q8WU10 500 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 C2orf15Q8WU43 125 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 TFB1MQ8WVM0 346 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 ITFG2Q969R8 447 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 MYLPFQ96A32 169 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 PIWIL1Q96J94 861 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 C5orf34Q96MH7 638 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 QKIQ96PU8 341 aaKnown RBP eCLIP5.01□□□□□ -1.61
SRP54-211ENST00000556445 CSPG4P5Q96PW8 444 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 CD180Q99467 661 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 VAT1Q99536 393 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 MGME1Q9BQP7 344 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 TRPV6Q9H1D0 765 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 CRLF2Q9HC73 371 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ALKBH4Q9NXW9 302 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 STK39Q9UEW8 545 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 LGALS13Q9UHV8 139 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 SLC12A6Q9UHW9 1150 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 SLC24A2Q9UI40 661 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 FBXW11Q9UKB1 542 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ADAM28Q9UKQ2 775 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 INTS6Q9UL03 887 aaKnown RBP5.01□□□□□ -1.61
SRP54-211ENST00000556445 SUFUQ9UMX1 484 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 ASB3Q9Y575 518 aa5.01□□□□□ -1.61
SRP54-211ENST00000556445 CLUHO75153 1309 aa5□□□□□ -1.61
SRP54-211ENST00000556445 EXOC1LA0A1B0GW35 172 aa5□□□□□ -1.61
SRP54-211ENST00000556445 WIPF3A6NGB9 483 aa5□□□□□ -1.61
SRP54-211ENST00000556445 ERI2A8K979 691 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 HHLA1C9JL84 531 aa5□□□□□ -1.61
SRP54-211ENST00000556445 EEF2KO00418 725 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 TRDMT1O14717 391 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 CD3EAPO15446 510 aaKnown RBP5□□□□□ -1.61
SRP54-211ENST00000556445 MAGEB3O15480 346 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms