RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PCDHGA7Q9Y5G6 932 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 AP1M2Q9Y6Q5 423 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 HEATR5BQ9P2D3 2071 aa12.13□□□□□ -0.47
SYNE2-219ENST00000555323 A0A1B0GTL3 188 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 FEZF1A0PJY2 475 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PMS2P1A4D2B8 440 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 TRABD2BA6NFA1 517 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 TMEM150CB9EJG8 249 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 TXNDC9O14530 226 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 UBFD1O14562 309 aaKnown RBP12.12□□□□□ -0.47
SYNE2-219ENST00000555323 OR1F1O43749 312 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 BCL6P41182 706 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PKNOX1P55347 436 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ITGA1P56199 1179 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ERVPABLB-1P60509 514 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PPP2R2AP63151 447 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 GABREP78334 506 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 MEF2AQ02078 507 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-219ENST00000555323 FOXM1Q08050 763 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 LCP2Q13094 533 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PWP1Q13610 501 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 SLBPQ14493 270 aaKnown RBP eCLIP12.12□□□□□ -0.47
SYNE2-219ENST00000555323 HIST2H2ACQ16777 129 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PRTGQ2VWP7 1150 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 HSP90B2PQ58FF3 399 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 TMEM164Q5U3C3 297 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 HHATQ5VTY9 493 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 YOD1Q5VVQ6 348 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-219ENST00000555323 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 MED27Q6P2C8 311 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 VN1R4Q7Z5H5 301 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 HOMEZQ8IX15 550 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ARHGEF39Q8N4T4 335 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 CCNYL1Q8N7R7 359 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ANKRD42Q8N9B4 389 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ANKRD53Q8N9V6 530 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 TRPV3Q8NET8 790 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 OR4F6Q8NGB9 312 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 USP7Q93009 1102 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 SELENOSQ9BQE4 189 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-219ENST00000555323 DRC3Q9H069 523 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ACSS2Q9NR19 701 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PSD3Q9NYI0 1048 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PISDQ9UG56 409 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 PCDHGA11Q9Y5H2 935 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
SYNE2-219ENST00000555323 C9orf172C9J069 976 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 CLEC3AO75596 197 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 OR2B3O76000 313 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 SNUPNO95149 360 aaKnown RBP12.11□□□□□ -0.47
SYNE2-219ENST00000555323 TNFSF15O95150 251 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 ESRRBO95718 433 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 CTSBP07858 339 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 FGF4P08620 206 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 TSPAN8P19075 237 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 SPINK2P20155 84 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 GRK2P25098 689 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 HPDP32754 393 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-219ENST00000555323 GPS2Q13227 327 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 RBBP5Q15291 538 aaKnown RBP12.11□□□□□ -0.47
SYNE2-219ENST00000555323 DEFB110Q30KQ9 67 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 WASHC2DQ5SRD0 308 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 C10orf62Q5T681 223 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-219ENST00000555323 PWWP2BQ6NUJ5 590 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 LETMD1Q6P1Q0 360 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 SYVN1Q86TM6 617 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 GPR135Q8IZ08 494 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 CAMKVQ8NCB2 501 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 WDR20Q8TBZ3 569 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 MDM1Q8TC05 714 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 NT5CQ8TCD5 201 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 CREB3L4Q8TEY5 395 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 AGAP11Q8TF27 550 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 SLC13A3Q8WWT9 602 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 N4BP2L2Q92802 583 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-219ENST00000555323 RERGQ96A58 199 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-219ENST00000555323 CDK15Q96Q40 435 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 MLXIPLQ9NP71 852 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 TRPS1Q9UHF7 1281 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 ACSL6Q9UKU0 697 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 PPT2Q9UMR5 302 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 KIF26BQ2KJY2 2108 aa12.11□□□□□ -0.47
SYNE2-219ENST00000555323 SPTBN4Q9H254 2564 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 WDR91A4D1P6 747 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 AGRPO00253 132 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 OR4F21O95013 312 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms