RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CPLX3Q8WVH0 158 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ELMO1Q92556 727 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 FAM168AQ92567 244 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 P3H4Q92791 437 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 MIEF2Q96C03 454 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 IL17FQ96PD4 163 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ALPK1Q96QP1 1244 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 SELENOSQ9BQE4 189 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 C10orf88Q9H8K7 445 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ARNT2Q9HBZ2 717 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 IL1RAPL1Q9NZN1 696 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 C3orf18Q9UK00 162 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 MEMO1Q9Y316 297 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 HYOU1Q9Y4L1 999 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 KLK4Q9Y5K2 254 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 JMJD1CQ15652 2540 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 SCN3AQ9NY46 2000 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 SHISA3A0PJX4 238 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 OR5H15A6NDH6 313 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 SMTNL1A8MU46 457 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 IDSB3KWA1 339 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 PSTPIP1O43586 416 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 PRAMEF2O60811 474 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 SERPINC1P01008 464 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 FTH1P02794 183 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 CD1EP15812 388 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 COMTP21964 271 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 PSMA3P25788 255 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 TPP2P29144 1249 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 FOXN2P32314 431 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 CCNFP41002 786 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 SLC1A1P43005 524 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 MARCKSL1P49006 195 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 SMSP52788 366 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ITIH4Q14624 930 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 BRD3Q15059 726 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 DNAJC21Q5F1R6 531 aaKnown RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 TFDP3Q5H9I0 405 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ZC3H12BQ5HYM0 836 aaKnown RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ITPRIPL1Q6GPH6 555 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 FRMPD2BQ6IN97 320 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF449Q6P9G9 518 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 FIGLAQ6QHK4 219 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 BBS12Q6ZW61 710 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 RNF44Q7L0R7 432 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 VRK3Q8IV63 474 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 CEP97Q8IW35 865 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 DCUN1D3Q8IWE4 304 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 CHERPQ8IWX8 916 aaKnown RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 SLC22A15Q8IZD6 547 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 OR2L8Q8NGY9 312 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 LKAAEAR1Q8TD35 194 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 THAP3Q8WTV1 239 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 IQCDQ96DY2 449 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 GPR137Q96N19 417 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 TBL1YQ9BQ87 522 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 TMEM121Q9BTD3 319 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 NAT10Q9H0A0 1025 aaKnown RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 SYNPO2LQ9H987 977 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF304Q9HCX3 659 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 RIC8BQ9NVN3 520 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 NLE1Q9NVX2 485 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF282Q9UDV7 671 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 CIDEBQ9UHD4 219 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
ATXN3-219ENST00000553488 LUC7L2Q9Y383 392 aaKnown RBP6.9□□□□□ -1.3
ATXN3-219ENST00000553488 FN1P02751 2386 aaKnown RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ZANQ9Y493 2812 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 LOC105369274A0A096LPK9 316 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 LOC102723532A0A0G2JNH3 316 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 HYKKA2RU49 373 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ASPDHA6ND91 283 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ZNF503-AS2A6NEH8 195 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 OR51F1A6NGY5 319 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TARM1B6A8C7 271 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 APOC4-APOC2K7ER74 178 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 QSOX1O00391 747 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ADAM10O14672 748 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 RASGRF2O14827 1237 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FFAR3O14843 346 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 GPR42O15529 346 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 KDM1AO60341 852 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 SRPX2O60687 465 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 GPC4O75487 556 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FKBP9O95302 570 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 APOC2P02655 101 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TNNT1P13805 278 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 CD9P21926 228 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 FBLP22087 321 aaKnown RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 PSMB5P28074 263 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 CASP6P55212 293 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 VSX2P58304 361 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 CSNK1G2P78368 415 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 PLOD1Q02809 727 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-219ENST00000553488 OCA2Q04671 838 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 SPARCL1Q14515 664 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 TCEAL1Q15170 157 aa6.89□□□□□ -1.31
ATXN3-219ENST00000553488 LONRF1Q17RB8 773 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms