RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 SPTBN4Q9H254 2564 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 H0YIV9 168 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 OR7A17O14581 309 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 NVLO15381 856 aaKnown RBP16.46■□□□□ 0.23
ITGA5-213ENST00000553071 ZSCAN9O15535 394 aaPredicted RBP16.46■□□□□ 0.23
ITGA5-213ENST00000553071 DXOO77932 396 aaKnown RBP16.46■□□□□ 0.23
ITGA5-213ENST00000553071 ESRRBO95718 433 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SERPINE1P05121 402 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 ENO1P06733 434 aaKnown RBP16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SLC35G6P0C7Q6 338 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 CCL4P13236 92 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 VARSP26640 1264 aaKnown RBP16.46■□□□□ 0.23
ITGA5-213ENST00000553071 CD82P27701 267 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 GABRA4P48169 554 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 MAPK10P53779 464 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 GABREP78334 506 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 ZNF33BQ06732 778 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 KCNAB1Q14722 419 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 GPR19Q15760 415 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 GARNL3Q5VVW2 1013 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 ATG16L1Q676U5 607 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 FOXR1Q6PIV2 292 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 TTC29Q8NA56 475 aaPredicted RBP16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SLC13A3Q8WWT9 602 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SLC46A1Q96NT5 459 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SCNM1Q9BWG6 230 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SLC7A5P2Q9GIP4 190 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 RHBGQ9H310 441 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 GSTO2Q9H4Y5 243 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 ZBTB26Q9HCK0 441 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 PRM3Q9NNZ6 103 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 TRPS1Q9UHF7 1281 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SNX6Q9UNH7 406 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 SRPK3Q9UPE1 567 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 PCDHB3Q9Y5E6 796 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 PCDHGA7Q9Y5G6 932 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 PCDHGA4Q9Y5G9 962 aa16.46■□□□□ 0.23
ITGA5-213ENST00000553071 TMEM114B3SHH9 223 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 H0YGG7 62 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 PRAMEF10O60809 474 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 TNFSF15O95150 251 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 HGFP14210 728 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 NR1D1P20393 614 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 VSX2P58304 361 aaPredicted RBP16.45■□□□□ 0.22
ITGA5-213ENST00000553071 ARF3P61204 181 aaPredicted RBP16.45■□□□□ 0.22
ITGA5-213ENST00000553071 SHC2P98077 582 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 RGS1Q08116 209 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 NDUFA9Q16795 377 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 WASHC2DQ5SRD0 308 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 TTC19Q6DKK2 380 aaPredicted RBP16.45■□□□□ 0.22
ITGA5-213ENST00000553071 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 ASPGQ86U10 573 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 LAS2Q8IYD9 372 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 CSNK1A1LQ8N752 337 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 NSUN5Q96P11 429 aaKnown RBP16.45■□□□□ 0.22
ITGA5-213ENST00000553071 NDC1Q9BTX1 674 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 MECRQ9BV79 373 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 SLC29A3Q9BZD2 475 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 THSD1Q9NS62 852 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 INTS9Q9NV88 658 aaKnown RBP16.45■□□□□ 0.22
ITGA5-213ENST00000553071 PSD3Q9NYI0 1048 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 AK5Q9Y6K8 562 aa16.45■□□□□ 0.22
ITGA5-213ENST00000553071 FEZF1A0PJY2 475 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 WDR91A4D1P6 747 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 FITM1A5D6W6 292 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 LCMT2O60294 686 aaKnown RBP16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CRCPO75575 148 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CLEC3AO75596 197 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 KRT6AP02538 564 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 KRT6BP04259 564 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 EIF2S1P05198 315 aaKnown RBP16.44■□□□□ 0.22
ITGA5-213ENST00000553071 SERPINA6P08185 405 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 BCL6P41182 706 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 PIK3CBP42338 1070 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 KRT6CP48668 564 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 WDR4P57081 412 aaKnown RBP16.44■□□□□ 0.22
ITGA5-213ENST00000553071 ERVPABLB-1P60509 514 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 SKP1P63208 163 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 MEF2AQ02078 507 aaPredicted RBP16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 IFT88Q13099 833 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 TRAF3Q13114 568 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 STX3Q13277 289 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CAMK2BQ13554 666 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 RCN2Q14257 317 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CHI3L2Q15782 390 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CPSF6Q16630 551 aaKnown RBP eCLIP16.44■□□□□ 0.22
ITGA5-213ENST00000553071 TMEM126BQ8IUX1 230 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 SRFBP1Q8NEF9 429 aaKnown RBP16.44■□□□□ 0.22
ITGA5-213ENST00000553071 OR7G3Q8NG95 312 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 OR4F6Q8NGB9 312 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 OR52B6Q8NGF0 335 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 OR1L3Q8NH93 324 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 USP7Q93009 1102 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 CENPKQ9BS16 269 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 ELOVL6Q9H5J4 265 aa16.44■□□□□ 0.22
ITGA5-213ENST00000553071 MID1IP1Q9NPA3 183 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms