RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CROTQ9UKG9 612 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 RAB21Q9UL25 225 aa10.15□□□□□ -0.78
PTCH1-225ENST00000551845 TLDC2A0PJX2 215 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 FEZF1A0PJY2 475 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 K7ENP7 123 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 UBXN8O00124 270 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 HAT1O14929 419 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 OR1F1O43749 312 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 LCMT2O60294 686 aaKnown RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 NRP2O60462 931 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 RECKO95980 971 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 RAB40ALP0C0E4 278 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 C1GALT1C1LP0DN25 315 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 MTHFD2P13995 350 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 GFAPP14136 432 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 KRT15P19012 456 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 SLCO1A2P46721 670 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 CDC16Q13042 620 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 DNASE1L3Q13609 305 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 RASA2Q15283 850 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 NDUFA9Q16795 377 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 PFKFB4Q16877 469 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 MUM1Q2TAK8 710 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 FBXO48Q5FWF7 155 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 C1orf189Q5VU69 101 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 GARNL3Q5VVW2 1013 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 MLIPQ5VWP3 458 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 INO80CQ6PI98 192 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 LCA5Q86VQ0 697 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 TDRPQ86YL5 185 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 MFSD9Q8NBP5 474 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 CAMKVQ8NCB2 501 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 SLC13A3Q8WWT9 602 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 SLC45A3Q96JT2 553 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 MRPL57Q9BQC6 102 aaKnown RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 AIF1LQ9BQI0 150 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 SARGQ9BW04 601 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 ROPN1BQ9BZX4 212 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 ROPN1Q9HAT0 212 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 PELI2Q9HAT8 420 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 ZNF358Q9NW07 568 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 GPN3Q9UHW5 284 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 TMCO1Q9UM00 188 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 CDC14AQ9UNH5 594 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 ANGPTL3Q9Y5C1 460 aa10.14□□□□□ -0.79
PTCH1-225ENST00000551845 TNPO3Q9Y5L0 923 aaKnown RBP10.14□□□□□ -0.79
PTCH1-225ENST00000551845 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 COL6A6A6NMZ7 2263 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 A0A1B0GX78 115 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 TRBC2A0A5B9 178 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SMIM23A6NLE4 172 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 ZNF891A8MT65 544 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 C9J4A7 227 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 DSCR3O14972 297 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 KLK8O60259 260 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SMIM24O75264 130 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 CDH16O75309 829 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 NUDT17P0C025 328 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 EPB42P16452 691 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 F8A1P23610 371 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 PTPN4P29074 926 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 CCT5P48643 541 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 ALDH18A1P54886 795 aaKnown RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 MEF2AQ02078 507 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 NFATC3Q12968 1075 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SRSF6Q13247 344 aaKnown RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 RBBP5Q15291 538 aaKnown RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 PDK4Q16654 411 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 HIST2H2ACQ16777 129 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 PRTGQ2VWP7 1150 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 NKAIN1Q4KMZ8 207 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 COLEC12Q5KU26 742 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 HIST2H2AA3Q6FI13 130 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 LCN10Q6JVE6 187 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 PRMT9Q6P2P2 845 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SLCO4C1Q6ZQN7 724 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 LRRC70Q7Z2Q7 622 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 TMPRSS11BQ86T26 416 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 ASPGQ86U10 573 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 KRT78Q8N1N4 520 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SNX31Q8N9S9 440 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 CT55Q8WUE5 264 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SNRNP27Q8WVK2 155 aaKnown RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 GBP5Q96PP8 586 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 TMEM79Q9BSE2 394 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 IFT80Q9P2H3 777 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 CPSF2Q9P2I0 782 aaKnown RBP10.13□□□□□ -0.79
PTCH1-225ENST00000551845 OPTCQ9UBM4 332 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 ZFP69BQ9UJL9 534 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 SH2B3Q9UQQ2 575 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 PCDHGA6Q9Y5G7 932 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 PCDHGA4Q9Y5G9 962 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 KIF26BQ2KJY2 2108 aa10.13□□□□□ -0.79
PTCH1-225ENST00000551845 HECTD1Q9ULT8 2610 aa10.12□□□□□ -0.79
PTCH1-225ENST00000551845 A0A1W2PPM1 405 aa10.12□□□□□ -0.79
PTCH1-225ENST00000551845 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
PTCH1-225ENST00000551845 K7EPI3 171 aa10.12□□□□□ -0.79
PTCH1-225ENST00000551845 TERTO14746 1132 aaKnown RBP10.12□□□□□ -0.79
PTCH1-225ENST00000551845 NKX2-8O15522 239 aa10.12□□□□□ -0.79
PTCH1-225ENST00000551845 CREG1O75629 220 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms