RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TWSG1Q9GZX9 223 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CHRNA10Q9GZZ6 450 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 VIPAS39Q9H9C1 493 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ASCL3Q9NQ33 180 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ACSS2Q9NR19 701 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 MKS1Q9NXB0 559 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 NKIRAS1Q9NYS0 192 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 FOXJ2Q9P0K8 574 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 SLC17A7Q9P2U7 560 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 GPN3Q9UHW5 284 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 PCTPQ9UKL6 214 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 EMCNQ9ULC0 261 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 SRPK3Q9UPE1 567 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 STK38LQ9Y2H1 464 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PLLPQ9Y342 182 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ASB1Q9Y576 335 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PCDHGA7Q9Y5G6 932 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PCDHGA3Q9Y5H0 932 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 KLK4Q9Y5K2 254 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ACTL7BQ9Y614 415 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PIEZO1Q92508 2521 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 TEX51A0A1B0GUA7 166 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 CDRT15L2A8MXV6 281 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 C9J4A7 227 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 G3V2L1 256 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 E2F3O00716 465 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 TM9SF1O15321 606 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PRPF4O43172 522 aaKnown RBP eCLIP6.03□□□□□ -1.44
LTBR-212ENST00000543542 KLK10O43240 276 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 HCRTR1O43613 425 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 LCMT2O60294 686 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 RAD1O60671 282 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 TRIM13O60858 407 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 DXOO77932 396 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 ZWINTO95229 277 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 TIAF1O95411 115 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MLYCDO95822 493 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 OTCP00480 354 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 CTSBP07858 339 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 RPS17P08708 135 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 SBK3P0C264 359 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MSL3P1P0C860 447 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 LIPCP11150 499 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PIM1P11309 404 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 ZNF28P17035 718 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 HMOX2P30519 316 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 ALDH3A1P30838 453 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 HPDP32754 393 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 AHRP35869 848 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 BCL6P41182 706 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 HNF4AP41235 474 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 SCTRP47872 440 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 AVPR1BP47901 424 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 GABRA4P48169 554 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PRKAA2P54646 552 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 NAGLUP54802 743 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 NAA20P61599 178 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 SKP1P63208 163 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 NFKB2Q00653 900 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 CLCQ05315 142 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 IFT88Q13099 833 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 GPS2Q13227 327 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 SLC9A5Q14940 896 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 CPSF6Q16630 551 aaKnown RBP eCLIP6.03□□□□□ -1.44
LTBR-212ENST00000543542 MUM1Q2TAK8 710 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 HKDC1Q2TB90 917 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 UNC50Q53HI1 259 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 HSP90B2PQ58FF3 399 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 TOR1AIP1Q5JTV8 583 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MANEAQ5SRI9 462 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 YOD1Q5VVQ6 348 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 BROXQ5VW32 411 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MLIPQ5VWP3 458 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 LIPMQ5VYY2 423 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 LIPJQ5W064 366 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 GRHL2Q6ISB3 625 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 IGF2-ASQ6U949 168 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 SLCO4C1Q6ZQN7 724 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 SH2D5Q6ZV89 423 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 NUDCD3Q8IVD9 361 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 CACNA2D3Q8IZS8 1091 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 NLGN4XQ8N0W4 816 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 ESX1Q8N693 406 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 METTL27Q8N6F8 245 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 ZNF740Q8NDX6 193 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 TRPV3Q8NET8 790 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 NLGN4YQ8NFZ3 816 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 OR4K1Q8NGD4 311 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 ZNF483Q8TF39 744 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 ZCCHC14Q8WYQ9 949 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 GATA6Q92908 595 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 COL26A1Q96A83 441 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MTFMTQ96DP5 389 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 L3HYPDHQ96EM0 354 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 FAR2Q96K12 515 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PKNOX2Q96KN3 472 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MAGEB10Q96LZ2 347 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 NSUN5Q96P11 429 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 CDK15Q96Q40 435 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 TMEM237Q96Q45 408 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms