RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 FRA10AC1Q70Z53 315 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 CYS1Q717R9 158 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 CCDC91Q7Z6B0 441 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 ASPGQ86U10 573 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 TCAIMQ8N3R3 496 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
CDCA3-208ENST00000540683 TRPV3Q8NET8 790 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 GIMAP7Q8NHV1 300 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 DNAJB14Q8TBM8 379 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 SLC13A3Q8WWT9 602 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 PDLIM2Q96JY6 352 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 C10orf90Q96M02 699 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 PRAP1Q96NZ9 151 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 KRT12Q99456 494 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 NDNQ99608 321 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 AIF1LQ9BQI0 150 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 SARGQ9BW04 601 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 SGPP1Q9BX95 441 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 PITHD1Q9GZP4 211 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-208ENST00000540683 KCNF1Q9H3M0 494 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 WHRNQ9P202 907 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 GALPQ9UBC7 116 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 MED16Q9Y2X0 877 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 KCNE2Q9Y6J6 123 aa9.87□□□□□ -0.83
CDCA3-208ENST00000540683 TRAV17A0A0B4J275 112 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 IGKV1-8A0A0C4DH67 115 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 TRBC2A0A5B9 178 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 E7ESA3 106 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 PYCARD-AS1I3L0S3 204 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 HAT1O14929 419 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 TTI1O43156 1089 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 CNOT3O75175 753 aaKnown RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 C8orf89P0DMQ9 161 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 IVDP26440 423 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 CASQ1P31415 396 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 AHRP35869 848 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 GLRBP48167 497 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 PER3P56645 1201 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ARG2P78540 354 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 POU4F1Q01851 419 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 CDC16Q13042 620 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 RAPSNQ13702 412 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 RCN2Q14257 317 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF169Q14929 603 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 EXT1Q16394 746 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 HKDC1Q2TB90 917 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 COLEC12Q5KU26 742 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 CDKL4Q5MAI5 379 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 MFSD4BQ5TF39 518 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ABHD17BQ5VST6 288 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 FAM69BQ5VUD6 431 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 RPUSD3Q6P087 351 aaKnown RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 FAM180AQ6UWF9 173 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 LRRC56Q8IYG6 542 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ZBED8Q8IZ13 594 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 METTL27Q8N6F8 245 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 HORMAD2Q8N7B1 307 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 MFSD9Q8NBP5 474 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 PPFIBP2Q8ND30 876 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ARMC2Q8NEN0 867 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ABHD11Q8NFV4 315 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ALKBH8Q96BT7 664 aaKnown RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 SLC30A3Q99726 388 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 TRIM56Q9BRZ2 755 aaKnown RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ERP44Q9BS26 406 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 RNF32Q9H0A6 362 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF700Q9H0M5 742 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 TSPYL1Q9H0U9 437 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 RHOJQ9H4E5 214 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 PELI2Q9HAT8 420 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 MKL2Q9ULH7 1088 aa9.86□□□□□ -0.83
CDCA3-208ENST00000540683 MDC1Q14676 2089 aaKnown RBP9.86□□□□□ -0.83
CDCA3-208ENST00000540683 CCDC88CQ9P219 2028 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 TNRC6AQ8NDV7 1962 aaKnown RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 LOC102723996A0A087X1L8 192 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 A0A0A6YYC8 382 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CCDC189A1A4V9 331 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CLEC18AA5D8T8 446 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 I3L1I5 382 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 PSMD12O00232 456 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ALOX12BO75342 701 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CRYABP02511 175 aaKnown RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 S100BP04271 92 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CTSBP07858 339 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 GP1BBP13224 206 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 NPPBP16860 134 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ZNF37AP17032 561 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 GNAZP19086 355 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 BCL6P41182 706 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CDKN2DP55273 166 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 PRSS12P56730 875 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 TAS2R50P59544 299 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 STXBP1P61764 594 aaKnown RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CSNK1G2P78368 415 aa9.85□□□□□ -0.83
CDCA3-208ENST00000540683 CKAP4Q07065 602 aaKnown RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 ACTN3Q08043 901 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-208ENST00000540683 TGM3Q08188 693 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms