RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.019e-7■■■■■ 34.9
CPSF7-217ENST00000537162 LMX1BO60663 402 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 GFPT2O94808 682 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 GNA14O95837 355 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 PLAUP00749 431 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 IL2RAP01589 272 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 TUBB4AP04350 444 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 CRYGSP22914 178 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 ARL4AP40617 200 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 NSFP46459 744 aaKnown RBP8.77□□□□□ -1.01
CPSF7-217ENST00000537162 AP1B1Q10567 949 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 FOXF2Q12947 444 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 ITGA9Q13797 1035 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 BRD3Q15059 726 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 SIX1Q15475 284 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-217ENST00000537162 SF1Q15637 639 aaKnown RBP8.77□□□□□ -1.01
CPSF7-217ENST00000537162 LRRC8BQ6P9F7 803 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 DCUN1D2Q6PH85 259 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 RNF44Q7L0R7 432 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 PRSS41Q7RTY9 318 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 SLC22A16Q86VW1 577 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 TBC1D21Q8IYX1 336 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 FAM109AQ8N4B1 249 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 PSD4Q8NDX1 1056 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 OR5K2Q8NHB8 316 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 SPATA22Q8NHS9 363 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 TSLPQ969D9 159 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 MVB12AQ96EY5 273 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 RAB11FIP5Q9BXF6 653 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 LDAHQ9H6V9 325 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 LUC7LQ9NQ29 371 aaKnown RBP8.77□□□□□ -1.01
CPSF7-217ENST00000537162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.77□□□□□ -1.01
CPSF7-217ENST00000537162 FAM169AQ9Y6X4 670 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 ROS1P08922 2347 aa8.77□□□□□ -1.01
CPSF7-217ENST00000537162 IGHV4-30-2A0A087WSY4 118 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 TRGV5A0A0B4J1U4 118 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 F8VZ95 297 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 KCNK1O00180 336 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 UBFD1O14562 309 aaKnown RBP8.76□□□□□ -1.01
CPSF7-217ENST00000537162 SNPHO15079 494 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 ITGA10O75578 1167 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 VENTXO95231 258 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 F13A1P00488 732 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 IGHV4-39P01824 125 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 CALB1P05937 261 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 ERVK-10P10266 1014 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 CCNCP24863 283 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 CTSSP25774 331 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 PCK1P35558 622 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 MC3RP41968 323 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 VLDLRP98155 873 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 ACTN3Q08043 901 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-217ENST00000537162 GRB7Q14451 532 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 DPYSL2Q16555 572 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 CLEC16AQ2KHT3 1053 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 TREML4Q6UXN2 200 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 RGS9BPQ6ZS82 235 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 C22orf34Q6ZV56 151 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 ARMC10Q8N2F6 343 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 FBXW8Q8N3Y1 598 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 LRRC17Q8N6Y2 441 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 OR9A4Q8NGU2 314 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 HSPH1Q92598 858 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 TADA1Q96BN2 335 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 IMP4Q96G21 291 aaKnown RBP8.76□□□□□ -1.01
CPSF7-217ENST00000537162 ART5Q96L15 291 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 GSDMAQ96QA5 445 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 TNFRSF13CQ96RJ3 184 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 LPAR4Q99677 370 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 MIPEPQ99797 713 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 FAM96AQ9H5X1 160 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 EXO5Q9H790 373 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 CHODLQ9H9P2 273 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 SEMA4BQ9NPR2 832 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-217ENST00000537162 INTS7Q9NVH2 962 aaKnown RBP8.76□□□□□ -1.01
CPSF7-217ENST00000537162 NDRG3Q9UGV2 375 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 POLG2Q9UHN1 485 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 PCDHA3Q9Y5H8 950 aa8.76□□□□□ -1.01
CPSF7-217ENST00000537162 SCN3AQ9NY46 2000 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 KRT87PA6NCN2 255 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 TARM1B6A8C7 271 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 OVOL3O00110 214 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 FCHO1O14526 889 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 P2RX6O15547 441 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 CDC123O75794 336 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-217ENST00000537162 AP2A1O95782 977 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 NDST3O95803 873 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 IGHV4-31P0DP07 118 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 VSIG8P0DPA2 414 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 ATP1B2P14415 290 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-217ENST00000537162 CD9P21926 228 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 SERPINB6P35237 376 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 CDKN1AP38936 164 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 AGTR2P50052 363 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF135P52742 658 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-217ENST00000537162 EMP3P54852 163 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 RHAGQ02094 409 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 RPA4Q13156 261 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms