RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CR1P17927 2039 aa2.97□□□□□ -1.93
CSDE1-209ENST00000525132 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
CSDE1-209ENST00000525132 MYCBP2O75592 4640 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 MYO18AQ92614 2054 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 FREM1Q5H8C1 2179 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 LOC100509620A0A075B734 347 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 TRAV34A0A0B4J273 112 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 TRBC2A0A5B9 178 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ARGFXA6NJG6 315 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 A6NNC1 897 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 DDX39AO00148 427 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 AP4M1O00189 453 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CHL1O00533 1208 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CES2O00748 559 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CPLX1O14810 134 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 HS6ST1O60243 411 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 GPRIN2O60269 458 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 HBP1O60381 514 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SLC22A3O75751 556 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CEACAM4O75871 244 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 NEBLO76041 1014 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SOX30O94993 753 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 C22orf31O95567 290 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 NUDT3O95989 172 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 IGHV4-34P06331 123 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 FESP07332 822 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SP1P08047 785 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SNRNP70P08621 437 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 PLA2G4BP0C869 781 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 NHLRC4P0CG21 123 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 NR2F6P10588 404 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ALPPL2P10696 532 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 TMEM11P17152 192 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ERCC2P18074 760 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 TRIM21P19474 475 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CAMPP49913 170 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 JAK3P52333 1124 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 GALCP54803 685 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SLC37A1P57057 533 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 TXNL4AP83876 142 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 OTUD4Q01804 1114 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ACTN3Q08043 901 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 DSC1Q08554 894 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CCDC15Q0P6D6 951 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SMU1Q2TAY7 513 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 C5orf22Q49AR2 442 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 GXYLT1Q4G148 440 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CCDC158Q5M9N0 1113 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ATF7IP2Q5U623 682 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CST9LP1Q5W188 147 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ISM2Q6H9L7 571 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 RAB12Q6IQ22 244 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CPLX2Q6PUV4 134 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 IL20RBQ6UXL0 311 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 KYAT3Q6YP21 454 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 GLDNQ6ZMI3 551 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 DPY19L3Q6ZPD9 716 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 MOB3CQ70IA8 216 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 PRSS45Q7RTY3 260 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 RNF144BQ7Z419 303 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 GPAT4Q86UL3 456 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 FAM160B2Q86V87 743 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 CMTM8Q8IZV2 173 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SIX6OS1Q8N1H7 587 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 GHDCQ8N2G8 530 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 ZNF619Q8N2I2 560 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SIRT6Q8N6T7 355 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 DNAAF1Q8NEP3 725 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SEMA6DQ8NFY4 1073 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 LILRB1Q8NHL6 650 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 TMEM159Q96B96 161 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 PTERQ96BW5 349 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 DGAT2Q96PD7 388 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 IWS1Q96ST2 819 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 PAFAH2Q99487 392 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 H2AFJQ9BTM1 129 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 KIFC3Q9BVG8 833 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 MRPL1Q9BYD6 325 aaKnown RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 REG4Q9BYZ8 158 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SNTG1Q9NSN8 517 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 PTGFRNQ9P2B2 879 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 UBA2Q9UBT2 640 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-209ENST00000525132 OSGIN1Q9UJX0 560 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 KLHL20Q9Y2M5 609 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 L3MBTL1Q9Y468 752 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 POMT1Q9Y6A1 747 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 SCN2AQ99250 2005 aa2.96□□□□□ -1.94
CSDE1-209ENST00000525132 FAM90A8PA6NJQ4 464 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 C17orf100A8MU93 164 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 IDSB3KWA1 339 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 D6RAR5 112 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 USP17L23D6RBM5 183 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 IFNL4K9M1U5 179 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 QSOX1O00391 747 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 PRPF4O43172 522 aaKnown RBP eCLIP2.95□□□□□ -1.945e-7■■■■□ 22.3
CSDE1-209ENST00000525132 AVILO75366 819 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 SLC25A12O75746 678 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 TPPPO94811 219 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 TOXO94900 526 aa2.95□□□□□ -1.94
CSDE1-209ENST00000525132 SLC4A1P02730 911 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms