RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NAV1Q8NEY1 1877 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 PLIN4Q96Q06 1357 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 SMCO2A6NFE2 343 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 A8MXE2 369 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 TULP2O00295 520 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 CPLX1O14810 134 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 C22orf31O95567 290 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 TIMP1P01033 207 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 IGHV4-39P01824 125 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 QDPRP09417 244 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 TCEA1P23193 301 aaKnown RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 SLC6A6P31641 620 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 RAD23AP54725 363 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 CDH11P55287 796 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 KCNJ10P78508 379 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 PPIGQ13427 754 aaKnown RBP eCLIP3.95□□□□□ -1.785e-7■■■□□ 14.6
HTT-210ENST00000512909 PTGISQ16647 500 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 UBE2SQ16763 222 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 ZNF628Q5EBL2 1059 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 SPECC1Q5M775 1068 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 ELFN2Q5R3F8 820 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 C9orf50Q5SZB4 431 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 PLA2G4FQ68DD2 849 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 SHQ1Q6PI26 577 aaKnown RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 PLXDC2Q6UX71 529 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 Q7L0L9 218 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 SLC26A9Q7LBE3 791 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 ZNF554Q86TJ5 538 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 THNSL1Q8IYQ7 743 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 ZNF611Q8N823 705 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 OR5M8Q8NGP6 311 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 TMEM143Q96AN5 459 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 CENPTQ96BT3 561 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 MOB3AQ96BX8 217 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 SCRN2Q96FV2 425 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 MYADMQ96S97 322 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 URM1Q9BTM9 101 aaKnown RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 PPIL3Q9H2H8 161 aaKnown RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 SLA2Q9H6Q3 261 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 ZWILCHQ9H900 591 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 PXMP2Q9NR77 195 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 PDRG1Q9NUG6 133 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 OLAHQ9NV23 265 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 RBM28Q9NW13 759 aaKnown RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 WDR35Q9P2L0 1181 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 RHCGQ9UBD6 479 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 Q9Y3F1 56 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 SIPA1L1O43166 1804 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 PHIPQ8WWQ0 1821 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 ATAD5Q96QE3 1844 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 DDX60LQ5H9U9 1706 aaKnown RBP3.95□□□□□ -1.78
HTT-210ENST00000512909 WDR19Q8NEZ3 1342 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 A0A1W2PPI3 338 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 URADA6NGE7 173 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 OR6C76A6NM76 312 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 DDX39AO00148 427 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 CYTH3O43739 400 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 CTSVO60911 334 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 TBX10O75333 385 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 CREG1O75629 220 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 KRT36O76013 467 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 BAG4O95429 457 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 ZNF286BP0CG31 522 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ERVFC1-1P60608 527 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 CX3CL1P78423 397 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 RBPJQ06330 500 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 PRKAA1Q13131 559 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 KIR2DS3Q14952 304 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ZNF672Q499Z4 452 aaPredicted RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 MFSD12Q6NUT3 480 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.94□□□□□ -1.78
HTT-210ENST00000512909 C11orf57Q6ZUT1 292 aaPredicted RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 FOXL2NBQ6ZUU3 175 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 C9orf139Q6ZV77 190 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ERN2Q76MJ5 926 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 MEPCEQ7L2J0 689 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 SPATA21Q7Z572 469 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 METTL23Q86XA0 190 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 RNF128Q8TEB7 428 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ZNF473Q8WTR7 871 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 ROBO4Q8WZ75 1007 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ST6GAL2Q96JF0 529 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 SGK494Q96LW2 274 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ZMAT2Q96NC0 199 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 SLC22A12Q96S37 553 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 C16orf70Q9BSU1 422 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 NAA11Q9BSU3 229 aaPredicted RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 SLC25A23Q9BV35 468 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 GTPBP2Q9BX10 602 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 UPF3AQ9H1J1 476 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 ALDH8A1Q9H2A2 487 aaPredicted RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 MTIF3Q9H2K0 278 aaKnown RBP3.94□□□□□ -1.78
HTT-210ENST00000512909 C6orf50Q9HD87 102 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 GKN1Q9NS71 199 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 TUBE1Q9UJT0 475 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 ASTN1O14525 1302 aa3.94□□□□□ -1.78
HTT-210ENST00000512909 EME2A4GXA9 379 aaPredicted RBP3.93□□□□□ -1.78
HTT-210ENST00000512909 FAM172BPA6NC97 362 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms