RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CHMP1AQ9HD42 196 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 FSCN3Q9NQT6 498 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 SLC2A8Q9NY64 477 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 DNMT3BQ9UBC3 853 aaKnown RBP3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 UXTQ9UBK9 157 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 HESX1Q9UBX0 185 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 NKX1-2Q9UD57 310 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 CYTH4Q9UIA0 394 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 RAB21Q9UL25 225 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 KCNJ14Q9UNX9 436 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 NCKAP1Q9Y2A7 1128 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 SLCO1B1Q9Y6L6 691 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 PARD3Q8TEW0 1356 aa3.47□□□□□ -1.85
HMGB3P15-201ENST00000507326 CGNL1Q0VF96 1302 aa3.46□□□□□ -1.85
HMGB3P15-201ENST00000507326 A0A087WUV0 522 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 A0A0U1RQJ8 604 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 A0A1B0GVM2 712 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 A1L4Q6 167 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 MACROD2A1Z1Q3 448 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SMCO3A2RU48 225 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMEM247A6NEH6 219 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 NPIPB13A6NJU9 1138 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ANKRD30BLA7E2S9 258 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 C12orf71A8MTZ7 269 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 NPIPB4C9JG80 1138 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 C9JVG2 144 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 GOLGA8TH3BQL2 631 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 NKX2-8O15522 239 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 OGG1O15527 345 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ST8SIA3O43173 380 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ARHGEF9O43307 516 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CTIFO43310 598 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 GRID2O43424 1007 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ATG13O75143 517 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 GCATO75600 419 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 UFL1O94874 794 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 KRT6AP02538 564 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CYP21A2P08686 494 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ALPIP09923 528 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMEM225BP0DP42 221 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CYP19A1P11511 503 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CKMT2P17540 419 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 DRD5P21918 477 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CDC25AP30304 524 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 PCK1P35558 622 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 NSFP46459 744 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 IER3P46695 156 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ME1P48163 572 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 LEPRP48357 1165 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 RGS19P49795 217 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ASCL1P50553 236 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 BCAP31P51572 246 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CEBPGP53567 150 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CRYBB1P53674 252 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 IST1P53990 364 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TPTEP56180 551 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 GSDMDP57764 484 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 LINC00205P59089 165 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 LILRA4P59901 499 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 RAB14P61106 215 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 B2MP61769 119 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 GCNT1Q02742 428 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CDK18Q07002 472 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CXCL9Q07325 125 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ARHGAP1Q07960 439 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TGM3Q08188 693 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 FGL1Q08830 312 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 PDE7AQ13946 482 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 E2F2Q14209 437 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 DMC1Q14565 340 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 DRAP1Q14919 205 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 FAM174BQ3ZCQ3 159 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CERKLQ49MI3 558 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TTMPQ5BVD1 217 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMEM196Q5HYL7 178 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CCNYL2Q5T2Q4 361 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SERTAD4-AS1Q5TG53 156 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 TBC1D9BQ66K14 1250 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 NCR3LG1Q68D85 454 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 C18orf63Q68DL7 685 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 KCTD11Q693B1 232 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SPECC1LQ69YQ0 1117 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 MSANTD2Q6P1R3 559 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 GJB7Q6PEY0 223 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SHC4Q6S5L8 630 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 KIRREL2Q6UWL6 708 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 DLEU7Q6UYE1 221 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ZNF852Q6ZMS4 543 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 Q6ZWC4 215 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 FRA10AC1Q70Z53 315 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 IRF2BP2Q7Z5L9 587 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 LINC00523Q86TU6 105 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CERS5Q8N5B7 392 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 RASGEF1AQ8N9B8 481 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 ASCC1Q8N9N2 400 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 FNDC5Q8NAU1 212 aa3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 SRFBP1Q8NEF9 429 aaKnown RBP3.46□□□□□ -1.86
HMGB3P15-201ENST00000507326 CDC26Q8NHZ8 85 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms