RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ZHX2Q9Y6X8 837 aa4.7□□□□□ -1.66
SF3B1-212ENST00000496458 GRIN2AQ12879 1464 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 CARMIL1Q5VZK9 1371 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 PCNX3Q9H6A9 2034 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 CLDN4O14493 209 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 SLCO2B1O94956 709 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 CELF2O95319 508 aaKnown RBP4.69□□□□□ -1.66
SF3B1-212ENST00000496458 APOA4P06727 396 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 ADRB2P07550 413 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 TRIM29Q14134 588 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 SMC1AQ14683 1233 aaKnown RBP4.69□□□□□ -1.66
SF3B1-212ENST00000496458 SLC30A6Q6NXT4 461 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 NOTUMQ6P988 496 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 FRRS1Q6ZNA5 592 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 IL17RELQ6ZVW7 336 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 SPAG16Q8N0X2 631 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 RYBPQ8N488 228 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-212ENST00000496458 ARL6IP6Q8N6S5 226 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 TEX9Q8N6V9 391 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 AMER3Q8N944 861 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 RASGEF1AQ8N9B8 481 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 MIPOL1Q8TD10 442 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 ATP8B4Q8TF62 1192 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 PROX1Q92786 737 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 CCDC47Q96A33 483 aaKnown RBP4.69□□□□□ -1.66
SF3B1-212ENST00000496458 TMCC3Q9ULS5 477 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 ADAMTS12P58397 1594 aa4.69□□□□□ -1.66
SF3B1-212ENST00000496458 MYH15Q9Y2K3 1946 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 CCL24O00175 119 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 AP5Z1O43299 807 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
SF3B1-212ENST00000496458 SNX3O60493 162 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 CAPN2P17655 700 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 EEF1B2P24534 225 aaKnown RBP4.68□□□□□ -1.66
SF3B1-212ENST00000496458 SOX3P41225 446 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 BPIFB3P59826 476 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 ACSM1Q08AH1 577 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 PPP2R5CQ13362 524 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 SCARB2Q14108 478 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 PTPN14Q15678 1187 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 TAB1Q15750 504 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 DNAJC21Q5F1R6 531 aaKnown RBP4.68□□□□□ -1.66
SF3B1-212ENST00000496458 ARMC4Q5T2S8 1044 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 RPUSD3Q6P087 351 aaKnown RBP4.68□□□□□ -1.66
SF3B1-212ENST00000496458 MSANTD4Q8NCY6 345 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 C11orf45Q8TAV5 145 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 TBC1D31Q96DN5 1066 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 C2orf48Q96LS8 159 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 AGAP4Q96P64 663 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 ZWILCHQ9H900 591 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 B3GAT2Q9NPZ5 323 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 NDE1Q9NXR1 346 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 TBC1D7Q9P0N9 293 aa4.68□□□□□ -1.66
SF3B1-212ENST00000496458 TRBV4-1A0A0J9YWV2 114 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 HMMRO75330 724 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 RPS6KA5O75582 802 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 KRT33AO76009 404 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 HSPA4LO95757 839 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 GSRP00390 522 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 OR3A2P47893 321 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 CLDN15P56746 228 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 RASGEF1BQ0VAM2 473 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 LY6DQ14210 128 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 NONOQ15233 471 aaKnown RBP eCLIP4.67□□□□□ -1.66
SF3B1-212ENST00000496458 PKN2Q16513 984 aaKnown RBP4.67□□□□□ -1.66
SF3B1-212ENST00000496458 TMEM266Q2M3C6 531 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 TTC31Q49AM3 519 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-212ENST00000496458 CRY2Q49AN0 593 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 NAA16Q6N069 864 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-212ENST00000496458 FCRLAQ7L513 359 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 Q8N377 158 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 OR8H1Q8NGG4 311 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 METTL21AQ8WXB1 218 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 ROBO4Q8WZ75 1007 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 PIK3R3Q92569 461 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 SNX21Q969T3 373 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 SPATA17Q96L03 361 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 FAM218AQ96MZ4 157 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 SOSTQ9BQB4 213 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 TDRD1Q9BXT4 1180 aaKnown RBP4.67□□□□□ -1.66
SF3B1-212ENST00000496458 HOXD1Q9GZZ0 328 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 PANK3Q9H999 370 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 DNAJC4Q9NNZ3 241 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 GSN-AS1Q9NRJ2 163 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 TXNDC16Q9P2K2 825 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 EPS15L1Q9UBC2 864 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 PA2G4Q9UQ80 394 aaKnown RBP4.67□□□□□ -1.66
SF3B1-212ENST00000496458 RIMBP3CA6NJZ7 1639 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 RIMBP3BA6NNM3 1639 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 RIMBP3Q9UFD9 1639 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 IGSF1Q8N6C5 1336 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 CUL7Q14999 1698 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 ARHGEF11O15085 1522 aa4.67□□□□□ -1.66
SF3B1-212ENST00000496458 CEP170Q5SW79 1584 aa4.66□□□□□ -1.66
SF3B1-212ENST00000496458 NUP160Q12769 1436 aa4.66□□□□□ -1.66
SF3B1-212ENST00000496458 C2CD4DB7Z1M9 353 aa4.66□□□□□ -1.66
SF3B1-212ENST00000496458 ATP6AP2O75787 350 aa4.66□□□□□ -1.66
SF3B1-212ENST00000496458 BAG3O95817 575 aa4.66□□□□□ -1.66
SF3B1-212ENST00000496458 OR52Z1P0C646 297 aa4.66□□□□□ -1.66
SF3B1-212ENST00000496458 ATP6V1B1P15313 513 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms