RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LINC00615Q96LM1 132 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 LRRC3BQ96PB8 259 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 DOK1Q99704 481 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 GABARAPL1Q9H0R8 117 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 DPEP2Q9H4A9 486 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 TRIM39Q9HCM9 518 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 TMEM9Q9P0T7 183 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 DEC1Q9P2X7 70 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 ATXN10Q9UBB4 475 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 FZD4Q9ULV1 537 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 VPS4AQ9UN37 437 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 GPR34Q9UPC5 381 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 LINC01553A4QN01 128 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 PRRT4C9JH25 899 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 C5orf67F2Z3F1 127 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 RNASET2O00584 256 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SLC16A6O15403 523 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 LILRB5O75023 590 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 UGT2B11O75310 529 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ITGAMP11215 1152 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 C6P13671 934 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ADRB3P13945 408 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 PRKACGP22612 351 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 IGFBP5P24593 272 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 DNAJA1P31689 397 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 RYKP34925 604 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 RPL3P39023 403 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 PHEXP78562 749 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 TUBA3CQ13748 450 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SF1Q15637 639 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 C9orf64Q5T6V5 341 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF691Q5VV52 312 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ANKRD26P1Q6NSI1 321 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 GALNT18Q6P9A2 607 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 PTOV1Q86YD1 416 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ETFBKMTQ8IXQ9 262 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SETD9Q8NE22 299 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 OR10Q1Q8NGQ4 319 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 NXPE3Q969Y0 559 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ARRDC3Q96B67 414 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 COQ8BQ96D53 544 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 WDR34Q96EX3 536 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 BHLHE41Q9C0J9 482 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 EHD1Q9H4M9 534 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ATAD3AQ9NVI7 634 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SH3BP4Q9P0V3 963 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 GULP1Q9UBP9 304 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 GMEB1Q9Y692 573 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 NUP214P35658 2090 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 LRRK1Q38SD2 2015 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 MYO1GB0I1T2 1018 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 BCKDKO14874 412 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SPINT1O43278 529 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 B4GAT1O43505 415 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 VEGFDO43915 354 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SH3BGRLO75368 114 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 C1GALT1C1LP0DN25 315 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 CDK4P11802 303 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 HLA-EP13747 358 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 NPPBP16860 134 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 IL7RP16871 459 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 IDSP22304 550 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 GSTM2P28161 218 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF763Q0D2J5 394 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 GRSF1Q12849 480 aaKnown RBP eCLIP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 DCTN2Q13561 401 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 CAMK1Q14012 370 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SLBPQ14493 270 aaKnown RBP eCLIP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 TEAD4Q15561 434 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 MEP1AQ16819 746 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ADNP2Q6IQ32 1131 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 TRIM74Q86UV6 250 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 LAS2Q8IYD9 372 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SYNPOQ8N3V7 929 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 CPA6Q8N4T0 437 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 CHDHQ8NE62 594 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 PIK3C3Q8NEB9 887 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 OR13F1Q8NGS4 319 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SMG7Q92540 1137 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 HSH2DQ96JZ2 352 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SGPP1Q9BX95 441 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 CCDC177Q9NQR7 707 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 SIRT5Q9NXA8 310 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 TMEFF2Q9UIK5 374 aaPredicted RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 CDH7Q9ULB5 785 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 ABCG2Q9UNQ0 655 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 BTBD3Q9Y2F9 522 aa10.67□□□□□ -0.7
CMSS1-208ENST00000496116 KIAA0100Q14667 2235 aaKnown RBP10.67□□□□□ -0.7
CMSS1-208ENST00000496116 PCM1Q15154 2024 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 A0A1B0GVG6 124 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 C1orf226A1L170 272 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 PIPSLA2A3N6 862 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 H3BMQ9 156 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 K7ESM1 405 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 MMP20O60882 483 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 SEMG1P04279 462 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 RB1P06400 928 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ABCB1P08183 1280 aaPredicted RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 FPR1P21462 350 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 VIPR2P41587 438 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms