RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 MBNL1Q9NR56 388 aaKnown RBP4.18□□□□□ -1.74
VPS52-222ENST00000495981 TMEM248Q9NWD8 314 aa4.18□□□□□ -1.74
VPS52-222ENST00000495981 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.18□□□□□ -1.74
VPS52-222ENST00000495981 NCKIPSDQ9NZQ3 722 aa4.18□□□□□ -1.74
VPS52-222ENST00000495981 LHX3Q9UBR4 397 aa4.18□□□□□ -1.74
VPS52-222ENST00000495981 NOCTQ9UK39 431 aaKnown RBP4.18□□□□□ -1.74
VPS52-222ENST00000495981 STAP1Q9ULZ2 295 aa4.18□□□□□ -1.74
VPS52-222ENST00000495981 ATP6V1DQ9Y5K8 247 aa4.18□□□□□ -1.74
VPS52-222ENST00000495981 HS3ST3A1Q9Y663 406 aa4.18□□□□□ -1.74
VPS52-222ENST00000495981 ANK3Q12955 4377 aaKnown RBP4.18□□□□□ -1.74
VPS52-222ENST00000495981 TCRBV5S1A1TA0A578 114 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 CPED1A4D0V7 1026 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 NEMP2A6NFY4 417 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 C2CD4BA6NLJ0 364 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 VWC2LB2RUY7 222 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 FPGTO14772 594 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 EPHB6O15197 1021 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 YY2O15391 372 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 INSIG1O15503 277 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PAX4O43316 350 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 DUX1O43812 170 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PRAMEF2O60811 474 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PMPCBO75439 489 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 OR2C1O95371 312 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PIGNO95427 931 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 METTL18O95568 372 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PAK4O96013 591 aaPredicted RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 RPLP0P05388 317 aaKnown RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 FESP07332 822 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 IL6RP08887 468 aaPredicted RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 LIPCP11150 499 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 CYP11B1P15538 503 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 ZNF18P17022 549 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 ITIH1P19827 911 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 MMP8P22894 467 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 ADRA1DP25100 572 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PCSK6P29122 969 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 UGT1A5P35504 534 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 RGRP47804 291 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 MTNR1AP48039 350 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PCP4P48539 62 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PPP5CP53041 499 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 LINC00310P59036 64 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 NUCB2P80303 420 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 CETN1Q12798 172 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 TMEM115Q12893 351 aaPredicted RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 C1orf61Q13536 156 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 NFATC4Q14934 902 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 TAF11Q15544 211 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 EXOC3L4Q17RC7 722 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 C15orf59Q2T9L4 293 aaPredicted RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 WSCD2Q2TBF2 565 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 DPCR1Q3MIW9 517 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PRR30Q53SZ7 412 aaPredicted RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 HS1BP3Q53T59 392 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 CARD16Q5EG05 197 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 CYP20A1Q6UW02 462 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 GBP6Q6ZN66 633 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 SPRED1Q7Z699 444 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 VPS36Q86VN1 386 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PELI3Q8N2H9 469 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 CCDC185Q8N715 623 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 EMC1Q8N766 993 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 RTL3Q8N8U3 475 aaKnown RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 OR52L2PQ8NGH6 319 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 WDR36Q8NI36 951 aaKnown RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 JOSD2Q8TAC2 188 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 C9orf43Q8TAL5 461 aaPredicted RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 SLC20A1Q8WUM9 679 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 FEM1CQ96JP0 617 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 GDAP1L1Q96MZ0 367 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 DCLRE1CQ96SD1 692 aaKnown RBP4.17□□□□□ -1.74
VPS52-222ENST00000495981 CD180Q99467 661 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 GPR87Q9BY21 358 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 KLC2Q9H0B6 622 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 GANQ9H2C0 597 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 GLOD4Q9HC38 313 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 PPP4R1LQ9P1A2 415 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 SPASTQ9UBP0 616 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 DKK3Q9UBP4 350 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 DKK2Q9UBU2 259 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 HSPB7Q9UBY9 170 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 KLQ9UEF7 1012 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 SLC12A6Q9UHW9 1150 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 RWDD2AQ9UIY3 292 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 OSGIN2Q9Y236 505 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 TP53TG5Q9Y2B4 290 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 ADAM18Q9Y3Q7 739 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 KCNE2Q9Y6J6 123 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 DUSP10Q9Y6W6 482 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 POLEQ07864 2286 aa4.17□□□□□ -1.74
VPS52-222ENST00000495981 TCP11X1B4DZS4 312 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 GOLGA8SH3BPF8 625 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 RAMP2O60895 175 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 TSPAN9O75954 239 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 CCNDBP1O95273 360 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 HSPA4LO95757 839 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 SPARCP09486 303 aa4.16□□□□□ -1.74
VPS52-222ENST00000495981 TMIGD3P0DMS9 266 aaPredicted RBP4.16□□□□□ -1.74
VPS52-222ENST00000495981 COX7A2P14406 83 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms