RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BDH2Q9BUT1 245 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 TCEAL2Q9H3H9 227 aaPredicted RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 ASB1Q9Y576 335 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 GMEB1Q9Y692 573 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 TTKP33981 857 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 GTF2H3Q13889 308 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 ALG11Q2TAA5 492 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 PYCR3Q53H96 274 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 SLC2A7Q6PXP3 512 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 RD3Q7Z3Z2 195 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 DPP10Q8N608 796 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 KLHDC7BQ96G42 594 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 CHID1Q9BWS9 393 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 MAGEL2Q9UJ55 1249 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 USP22Q9UPT9 525 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 POP7O75817 140 aaKnown RBP21.97■■□□□ 1.11
USF3-203ENST00000491165 GNPDA1P46926 289 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 EIF2B5Q13144 721 aaKnown RBP21.97■■□□□ 1.11
USF3-203ENST00000491165 NFE2L1Q14494 772 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 LPAL2Q16609 132 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 PRR23BQ6ZRT6 265 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 FAM83HQ6ZRV2 1179 aaPredicted RBP21.97■■□□□ 1.11
USF3-203ENST00000491165 CHST15Q7LFX5 561 aaPredicted RBP21.97■■□□□ 1.11
USF3-203ENST00000491165 LRRTM4Q86VH4 590 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 DCBLD1Q8N8Z6 715 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 ELMO1Q92556 727 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 ZC3H10Q96K80 434 aaKnown RBP21.97■■□□□ 1.11
USF3-203ENST00000491165 NSMCE2Q96MF7 247 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 CCM2Q9BSQ5 444 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 CARS2Q9HA77 564 aaKnown RBP21.97■■□□□ 1.11
USF3-203ENST00000491165 CXorf21Q9HAI6 301 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 LATS2Q9NRM7 1088 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 V9GYQ6 96 aa21.97■■□□□ 1.11
USF3-203ENST00000491165 hCG_2014768A0A024R1R8 64 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 BCAT2O15382 392 aaPredicted RBP21.96■■□□□ 1.11
USF3-203ENST00000491165 PFDN1O60925 122 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 SNAP29O95721 258 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 MT-ND1P03886 318 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 HTR1BP28222 390 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 PREPP48147 710 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 OR4D2P58180 307 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 HSPA14Q0VDF9 509 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 WDR45BQ5MNZ6 344 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 Q6ZSR9 355 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 USP51Q70EK9 711 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 ZBTB2Q8N680 514 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 OR52B6Q8NGF0 335 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 ZNF420Q8TAQ5 688 aaPredicted RBP21.96■■□□□ 1.11
USF3-203ENST00000491165 RNF217Q8TC41 542 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 LINC00615Q96LM1 132 aaPredicted RBP21.96■■□□□ 1.11
USF3-203ENST00000491165 RNF145Q96MT1 663 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 YTHDF1Q9BYJ9 559 aaKnown RBP21.96■■□□□ 1.11
USF3-203ENST00000491165 PIF1Q9H611 641 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 NUDT4Q9NZJ9 180 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 CDC14AQ9UNH5 594 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 PCDHB3Q9Y5E6 796 aa21.96■■□□□ 1.11
USF3-203ENST00000491165 PDHA2P29803 388 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 ERVPABLB-1P60509 514 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 CTBSQ01459 385 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 TGFBIQ15582 683 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 GLYATQ6IB77 296 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 CEP68Q76N32 757 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 CCL4L1Q8NHW4 92 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 ZNF514Q96K75 400 aaPredicted RBP21.95■■□□□ 1.11
USF3-203ENST00000491165 CDK15Q96Q40 435 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 KLQ9UEF7 1012 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 R4GN57 208 aa21.95■■□□□ 1.11
USF3-203ENST00000491165 GPR179Q6PRD1 2367 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 GPR89AB7ZAQ6 455 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 FTH1P02794 183 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 GPR89BP0CG08 455 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 CDH1P12830 882 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 ACP5P13686 325 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 ARL1P40616 181 aaPredicted RBP21.95■■□□□ 1.1
USF3-203ENST00000491165 SRP54P61011 504 aaKnown RBP21.95■■□□□ 1.1
USF3-203ENST00000491165 ADARB1P78563 741 aaKnown RBP21.95■■□□□ 1.1
USF3-203ENST00000491165 PMS2P3Q13401 168 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 SIM2Q14190 667 aaPredicted RBP21.95■■□□□ 1.1
USF3-203ENST00000491165 GBX1Q14549 363 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 PRAMEF14Q5SWL7 426 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 LETMD1Q6P1Q0 360 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 CROCCP3Q8IVE0 287 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 LRFN3Q9BTN0 628 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 PILRBQ9UKJ0 227 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 FAF1Q9UNN5 650 aaPredicted RBP21.95■■□□□ 1.1
USF3-203ENST00000491165 PCDHGA2Q9Y5H1 932 aa21.95■■□□□ 1.1
USF3-203ENST00000491165 ADAMTS9Q9P2N4 1935 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 ARHGEF17Q96PE2 2063 aaPredicted RBP21.94■■□□□ 1.1
USF3-203ENST00000491165 H0YAE9 185 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 TLR4O00206 839 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 QSOX1O00391 747 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 CNR2P34972 360 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 SFRP1Q8N474 314 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 OR2L2Q8NH16 312 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 TMEM168Q9H0V1 697 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 POLR1BQ9H9Y6 1135 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 GPSM3Q9Y4H4 160 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 TOR1BO14657 336 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 CAPN1P07384 714 aa21.94■■□□□ 1.1
USF3-203ENST00000491165 DCKP27707 260 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms