RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SLC7A4O43246 635 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 ANKRD34CP0C6C1 535 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 ELAVL4P26378 380 aaKnown RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 SSTR1P30872 391 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 DUTP33316 252 aaKnown RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 TCF7P36402 384 aaPredicted RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 KCNJ1P48048 391 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 SLC6A12P48065 614 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 PAX9P55771 341 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 KRT83P78385 493 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 TMEM187Q14656 261 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 EFTUD2Q15029 972 aaKnown RBP eCLIP3.42□□□□□ -1.864e-11■□□□□ 10.4
CD46-216ENST00000490278 MEP1BQ16820 701 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 FAM46CQ5VWP2 391 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 SLC24A5Q71RS6 500 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 OTOAQ7RTW8 1153 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 PRUNE1Q86TP1 453 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 HOOK3Q86VS8 718 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 CREBRFQ8IUR6 639 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 CROCCP3Q8IVE0 287 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 GPC2Q8N158 579 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 PRSS35Q8N3Z0 413 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 UXS1Q8NBZ7 420 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 OR4C15Q8NGM1 316 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 OR6S1Q8NH40 331 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 GDAP1Q8TB36 358 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 MAPK15Q8TD08 544 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 AFAP1L1Q8TED9 768 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 SGF29Q96ES7 293 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 RBM41Q96IZ5 413 aaKnown RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 ART5Q96L15 291 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 PI4K2AQ9BTU6 479 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 CLEC7AQ9BXN2 247 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 NYXQ9GZU5 481 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 EGLN3Q9H6Z9 239 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 TUFT1Q9NNX1 390 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 IARS2Q9NSE4 1012 aaKnown RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 TBC1D13Q9NVG8 400 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 VPS18Q9P253 973 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 SLC12A6Q9UHW9 1150 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 NOL7Q9UMY1 257 aaKnown RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 AGTPBP1Q9UPW5 1226 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 PPP1R3CQ9UQK1 317 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 ANGPTL3Q9Y5C1 460 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 KLK4Q9Y5K2 254 aa3.42□□□□□ -1.86
CD46-216ENST00000490278 ZFP37Q9Y6Q3 630 aaPredicted RBP3.42□□□□□ -1.86
CD46-216ENST00000490278 TRBV4-1A0A0J9YWV2 114 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 MTMR11A4FU01 709 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 C15orf61A6NNL5 157 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 KBTBD13C9JR72 458 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 MAGEC1O60732 1142 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 NXPH2O95156 264 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 TGDSO95455 350 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 YES1P07947 543 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 SP9P0CG40 484 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 MUTP22033 750 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 CTNNA1P35221 906 aaKnown RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 OR3A2P47893 321 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 NPBWR1P48145 328 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 CLDN17P56750 224 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 DCDC1P59894 354 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 CSNK2BP67870 215 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 GUCY2DQ02846 1103 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 FOLH1Q04609 750 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 YWHAHQ04917 246 aaPredicted RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 SRSF9Q13242 221 aaKnown RBP eCLIP3.41□□□□□ -1.86
CD46-216ENST00000490278 TMEM132DQ14C87 1099 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 E2F5Q15329 346 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 ANKRD20A4Q4UJ75 823 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 ANKRD20A8PQ5CZ79 823 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 FGD3Q5JSP0 725 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 ANKRD20A2Q5SQ80 823 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 ANKRD20A1Q5TYW2 823 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 ANKRD20A3Q5VUR7 823 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 OR4C11Q6IEV9 310 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 PRSS55Q6UWB4 352 aaPredicted RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 MEX3DQ86XN8 651 aaKnown RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 OR2T6Q8NHC8 308 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 SYT15Q9BQS2 421 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 TDRD1Q9BXT4 1180 aaKnown RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 LSG1Q9H089 658 aaKnown RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 UBQLN3Q9H347 655 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 C10orf88Q9H8K7 445 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 RAB9BQ9NP90 201 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.41□□□□□ -1.86
CD46-216ENST00000490278 SLCO1C1Q9NYB5 712 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 KLHL8Q9P2G9 620 aaPredicted RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 LEF1Q9UJU2 399 aaPredicted RBP3.41□□□□□ -1.86
CD46-216ENST00000490278 PILRBQ9UKJ0 227 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 SELENOKQ9Y6D0 94 aa3.41□□□□□ -1.86
CD46-216ENST00000490278 A0A0B4J203 849 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 A0A1W2PR80 420 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 ILVBLA1L0T0 632 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 A4D1N5 150 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 E5RGE8 158 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 H3BMM5 538 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 ZNF821O75541 412 aaPredicted RBP3.4□□□□□ -1.87
CD46-216ENST00000490278 ZFAND5O76080 213 aa3.4□□□□□ -1.87
CD46-216ENST00000490278 CYP2A7P20853 494 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms